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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
GAMESKVSFKITLTSDPRLPYKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGI
NPAQTAGNVFLKHGSELRIIPRDRVG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5hkh-a1-m1-cA 86 86 1.0000 1.0000 1.0000 1.36e-58 5hkh-a1-m1-cC_5hkh-a1-m1-cA
2 5hkh-a1-m1-cC 79 79 0.9186 1.0000 1.0000 6.82e-53 5hkh-a1-m1-cC_5hkh-a1-m1-cA
3 2vld-a1-m1-cA 223 49 0.2093 0.0807 0.3673 0.27 2vld-a1-m1-cB_2vld-a1-m1-cA
4 2vld-a1-m1-cB 222 49 0.2093 0.0811 0.3673 0.28 2vld-a1-m1-cB_2vld-a1-m1-cA
5 3j83-a1-m1-cG 276 74 0.2326 0.0725 0.2703 1.8 3j83-a1-m1-cF_3j83-a1-m1-cG
6 3j83-a1-m1-cF 276 74 0.2326 0.0725 0.2703 1.8 3j83-a1-m1-cF_3j83-a1-m1-cG
7 7wsu-a1-m1-cB 601 21 0.1395 0.0200 0.5714 4.9 7wsu-a1-m1-cA_7wsu-a1-m1-cB
8 7wsu-a1-m1-cA 601 21 0.1395 0.0200 0.5714 4.9 7wsu-a1-m1-cA_7wsu-a1-m1-cB
9 2ai1-a2-m5-cA 274 44 0.1512 0.0474 0.2955 5.7 2ai1-a2-m4-cA_2ai1-a2-m5-cA
10 2ai1-a2-m4-cA 274 44 0.1512 0.0474 0.2955 5.7 2ai1-a2-m4-cA_2ai1-a2-m5-cA
11 1lv8-a1-m1-cB 265 44 0.1512 0.0491 0.2955 7.4 1lv8-a1-m1-cB_1lv8-a1-m1-cF
12 1lv8-a1-m1-cF 266 44 0.1512 0.0489 0.2955 7.5 1lv8-a1-m1-cB_1lv8-a1-m1-cF
13 4pnp-a1-m3-cA 284 44 0.1512 0.0458 0.2955 7.5 4pnp-a1-m2-cA_4pnp-a1-m3-cA
14 4pnp-a1-m2-cA 284 44 0.1512 0.0458 0.2955 7.5 4pnp-a1-m2-cA_4pnp-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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