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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
GAMNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGK
KLGTIVIRGDNVILISPL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1th7-a1-m1-cN 78 78 1.0000 1.0000 1.0000 1.06e-51 1th7-a1-m1-cF_1th7-a1-m1-cN, 1th7-a1-m1-cH_1th7-a1-m1-cN
2 1th7-a1-m1-cH 78 78 1.0000 1.0000 1.0000 1.06e-51 1th7-a1-m1-cH_1th7-a1-m1-cN
3 1th7-a1-m1-cF 78 78 1.0000 1.0000 1.0000 1.06e-51 1th7-a1-m1-cF_1th7-a1-m1-cN
4 4emg-a2-m1-cN 69 61 0.3718 0.4203 0.4754 1.63e-12 4emg-a2-m1-cK_4emg-a2-m1-cN
5 4emg-a2-m1-cK 69 61 0.3718 0.4203 0.4754 1.63e-12 4emg-a2-m1-cK_4emg-a2-m1-cN
6 4xq3-a1-m1-cC 77 71 0.3974 0.4026 0.4366 1.28e-09 4xq3-a1-m1-cB_4xq3-a1-m1-cC
7 4xq3-a1-m1-cB 77 71 0.3974 0.4026 0.4366 1.28e-09 4xq3-a1-m1-cB_4xq3-a1-m1-cC
8 4n0a-a1-m2-cE 68 69 0.3333 0.3824 0.3768 1.28e-09 4n0a-a1-m2-cE_4n0a-a1-m2-cF
9 4n0a-a1-m2-cF 75 72 0.3462 0.3600 0.3750 4.72e-09 4n0a-a1-m2-cE_4n0a-a1-m2-cF
10 4n0a-a1-m2-cB 80 76 0.3462 0.3375 0.3553 1.43e-08 4n0a-a1-m1-cA_4n0a-a1-m2-cB
11 4n0a-a1-m1-cA 80 76 0.3462 0.3375 0.3553 1.43e-08 4n0a-a1-m1-cA_4n0a-a1-m2-cB
12 3bw1-a1-m4-cB 86 76 0.3462 0.3140 0.3553 2.24e-08 3bw1-a1-m4-cA_3bw1-a1-m4-cB
13 3bw1-a1-m4-cA 86 76 0.3462 0.3140 0.3553 2.24e-08 3bw1-a1-m4-cA_3bw1-a1-m4-cB
14 3pgg-a1-m3-cA 78 66 0.2821 0.2821 0.3333 4.63e-08 3pgg-a1-m3-cA_3pgg-a1-m3-cB
15 3pgg-a1-m3-cB 80 68 0.2821 0.2750 0.3235 1.37e-07 3pgg-a1-m3-cA_3pgg-a1-m3-cB
16 1ljo-a1-m6-cA 75 58 0.2821 0.2933 0.3793 1.74e-07 1ljo-a1-m2-cA_1ljo-a1-m6-cA
17 1ljo-a1-m2-cA 75 58 0.2821 0.2933 0.3793 1.74e-07 1ljo-a1-m2-cA_1ljo-a1-m6-cA
18 7rwm-a2-m1-cD 354 31 0.1667 0.0367 0.4194 2.1 7rwm-a2-m1-cD_7rwm-a2-m1-cC
19 7ni6-a1-m1-cB 1423 62 0.2179 0.0119 0.2742 2.2 7ni6-a1-m1-cB_7ni6-a1-m1-cA
20 7ni6-a1-m1-cA 1424 62 0.2179 0.0119 0.2742 2.2 7ni6-a1-m1-cB_7ni6-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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