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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
GAMVLPNQMVKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMECKGEEKVRSLG
EIVLRGNNVVLIQPQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ljo-a1-m6-cA 75 75 1.0000 1.0000 1.0000 1.00e-48 1ljo-a1-m2-cA_1ljo-a1-m6-cA
2 1ljo-a1-m2-cA 75 75 1.0000 1.0000 1.0000 1.00e-48 1ljo-a1-m2-cA_1ljo-a1-m6-cA
3 1th7-a1-m1-cN 78 58 0.2933 0.2821 0.3793 1.67e-07 1th7-a1-m1-cF_1th7-a1-m1-cN, 1th7-a1-m1-cH_1th7-a1-m1-cN
4 1th7-a1-m1-cH 78 58 0.2933 0.2821 0.3793 1.67e-07 1th7-a1-m1-cH_1th7-a1-m1-cN
5 1th7-a1-m1-cF 78 58 0.2933 0.2821 0.3793 1.67e-07 1th7-a1-m1-cF_1th7-a1-m1-cN
6 3pgg-a1-m3-cB 80 77 0.3600 0.3375 0.3506 6.42e-07 3pgg-a1-m3-cA_3pgg-a1-m3-cB
7 3pgg-a1-m3-cA 78 76 0.3467 0.3333 0.3421 4.05e-06 3pgg-a1-m3-cA_3pgg-a1-m3-cB
8 4xq3-a1-m1-cC 77 70 0.2800 0.2727 0.3000 1.24e-05 4xq3-a1-m1-cB_4xq3-a1-m1-cC
9 4xq3-a1-m1-cB 77 70 0.2800 0.2727 0.3000 1.24e-05 4xq3-a1-m1-cB_4xq3-a1-m1-cC
10 4emg-a2-m1-cN 69 69 0.2800 0.3043 0.3043 4.44e-04 4emg-a2-m1-cK_4emg-a2-m1-cN
11 4emg-a2-m1-cK 69 69 0.2800 0.3043 0.3043 4.44e-04 4emg-a2-m1-cK_4emg-a2-m1-cN
12 4emh-a4-m1-cK 58 59 0.2800 0.3621 0.3559 0.019 4emh-a4-m1-cJ_4emh-a4-m1-cK
13 4emh-a4-m1-cJ 58 59 0.2800 0.3621 0.3559 0.019 4emh-a4-m1-cJ_4emh-a4-m1-cK
14 4fsc-a2-m1-cB 264 29 0.1733 0.0492 0.4483 9.4 4fsc-a2-m1-cB_4fsc-a2-m1-cC
15 4fsc-a2-m1-cC 266 29 0.1733 0.0489 0.4483 9.4 4fsc-a2-m1-cB_4fsc-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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