Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=75)
GAMVLPNQMVKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMECKGEEKVRSLG
EIVLRGNNVVLIQPQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ljo-a1-m6-cA 75 75 1.0000 1.0000 1.0000 1.00e-48 1ljo-a1-m2-cA_1ljo-a1-m6-cA
2 1ljo-a1-m2-cA 75 75 1.0000 1.0000 1.0000 1.00e-48 1ljo-a1-m2-cA_1ljo-a1-m6-cA
3 1th7-a1-m1-cN 78 58 0.2933 0.2821 0.3793 1.67e-07 1th7-a1-m1-cF_1th7-a1-m1-cN, 1th7-a1-m1-cH_1th7-a1-m1-cN
4 1th7-a1-m1-cH 78 58 0.2933 0.2821 0.3793 1.67e-07 1th7-a1-m1-cH_1th7-a1-m1-cN
5 1th7-a1-m1-cF 78 58 0.2933 0.2821 0.3793 1.67e-07 1th7-a1-m1-cF_1th7-a1-m1-cN
6 3pgg-a1-m3-cB 80 77 0.3600 0.3375 0.3506 6.42e-07 3pgg-a1-m3-cA_3pgg-a1-m3-cB
7 3pgg-a1-m3-cA 78 76 0.3467 0.3333 0.3421 4.05e-06 3pgg-a1-m3-cA_3pgg-a1-m3-cB
8 4xq3-a1-m1-cC 77 70 0.2800 0.2727 0.3000 1.24e-05 4xq3-a1-m1-cB_4xq3-a1-m1-cC
9 4xq3-a1-m1-cB 77 70 0.2800 0.2727 0.3000 1.24e-05 4xq3-a1-m1-cB_4xq3-a1-m1-cC
10 4emg-a2-m1-cN 69 69 0.2800 0.3043 0.3043 4.44e-04 4emg-a2-m1-cK_4emg-a2-m1-cN
11 4emg-a2-m1-cK 69 69 0.2800 0.3043 0.3043 4.44e-04 4emg-a2-m1-cK_4emg-a2-m1-cN
12 4emh-a4-m1-cK 58 59 0.2800 0.3621 0.3559 0.019 4emh-a4-m1-cJ_4emh-a4-m1-cK
13 4emh-a4-m1-cJ 58 59 0.2800 0.3621 0.3559 0.019 4emh-a4-m1-cJ_4emh-a4-m1-cK
14 4fsc-a2-m1-cB 264 29 0.1733 0.0492 0.4483 9.4 4fsc-a2-m1-cB_4fsc-a2-m1-cC
15 4fsc-a2-m1-cC 266 29 0.1733 0.0489 0.4483 9.4 4fsc-a2-m1-cB_4fsc-a2-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600