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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
GAQVSSQKVGAHENSSTINYTTINYYRDSASNAASKQDFSQDPSKFTEPIKDVLIKTAPM
LN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1po2-a1-m9-c4 62 62 1.0000 1.0000 1.0000 3.69e-41 1po2-a1-m8-c4_1po2-a1-m9-c4
2 1po2-a1-m8-c4 62 62 1.0000 1.0000 1.0000 3.69e-41 1po2-a1-m8-c4_1po2-a1-m9-c4
3 6q0b-a1-m9-c4 68 68 1.0000 0.9118 0.9118 1.80e-38 6q0b-a1-m8-c4_6q0b-a1-m9-c4
4 6q0b-a1-m8-c4 68 68 1.0000 0.9118 0.9118 1.80e-38 6q0b-a1-m8-c4_6q0b-a1-m9-c4
5 1hxs-a1-m9-c4 68 68 1.0000 0.9118 0.9118 1.80e-38 1hxs-a1-m8-c4_1hxs-a1-m9-c4
6 1hxs-a1-m8-c4 68 68 1.0000 0.9118 0.9118 1.80e-38 1hxs-a1-m8-c4_1hxs-a1-m9-c4
7 1pov-a1-m9-c0 300 62 0.7258 0.1500 0.7258 2.65e-19 1pov-a1-m8-c0_1pov-a1-m9-c0
8 1pov-a1-m8-c0 300 62 0.7258 0.1500 0.7258 2.65e-19 1pov-a1-m8-c0_1pov-a1-m9-c0
9 3vdd-a1-m9-cD 36 36 0.3871 0.6667 0.6667 1.30e-13 3vdd-a1-m8-cD_3vdd-a1-m9-cD
10 3vdd-a1-m8-cD 36 36 0.3871 0.6667 0.6667 1.30e-13 3vdd-a1-m8-cD_3vdd-a1-m9-cD
11 7eai-a1-m9-cB 285 42 0.3871 0.0842 0.5714 8.10e-09 7eai-a1-m8-cB_7eai-a1-m9-cB
12 7eai-a1-m8-cB 285 42 0.3871 0.0842 0.5714 8.10e-09 7eai-a1-m8-cB_7eai-a1-m9-cB
13 8ayy-a1-m9-cB 264 16 0.2419 0.0568 0.9375 0.002 8ayy-a1-m58-cB_8ayy-a1-m9-cB
14 8ayy-a1-m58-cB 264 16 0.2419 0.0568 0.9375 0.002 8ayy-a1-m58-cB_8ayy-a1-m9-cB
15 1v9u-a1-m9-c4 25 18 0.1935 0.4800 0.6667 0.031 1v9u-a1-m8-c4_1v9u-a1-m9-c4
16 1v9u-a1-m8-c4 25 18 0.1935 0.4800 0.6667 0.031 1v9u-a1-m8-c4_1v9u-a1-m9-c4

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Reference:
Jacob Schwartz et al.

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