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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
GASQFFKDNCNRTTASLVEGVELTKYISDINNNTDGMYVVSSTGGVWRISRAKDYPDNVM
TAEMRKIAMAAVLSGMRVNMCASPASSPNVIWAIELEAE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1qb5-a1-m1-cH 99 99 1.0000 1.0000 1.0000 1.61e-70 1qb5-a1-m1-cG_1qb5-a1-m1-cH
2 1qb5-a1-m1-cG 99 99 1.0000 1.0000 1.0000 1.61e-70 1qb5-a1-m1-cG_1qb5-a1-m1-cH
3 4l63-a1-m1-cF 103 103 0.2424 0.2330 0.2330 1.2 4l63-a1-m1-cF_4l63-a1-m1-cE
4 4l63-a1-m1-cE 104 103 0.2424 0.2308 0.2330 1.2 4l63-a1-m1-cF_4l63-a1-m1-cE
5 1ugr-a2-m2-cB 228 46 0.1616 0.0702 0.3478 2.5 1ugr-a2-m1-cB_1ugr-a2-m2-cB
6 1ugr-a2-m1-cB 228 46 0.1616 0.0702 0.3478 2.5 1ugr-a2-m1-cB_1ugr-a2-m2-cB
7 5xsd-a1-m1-cB 276 68 0.1919 0.0688 0.2794 5.2 5xsd-a1-m1-cA_5xsd-a1-m1-cB
8 4rmb-a1-m1-cA 141 40 0.1313 0.0922 0.3250 5.8 4rmb-a1-m1-cA_4rmb-a1-m1-cB
9 5xsd-a1-m1-cA 250 68 0.1919 0.0760 0.2794 5.9 5xsd-a1-m1-cA_5xsd-a1-m1-cB
10 4rmb-a1-m1-cB 155 40 0.1313 0.0839 0.3250 7.0 4rmb-a1-m1-cA_4rmb-a1-m1-cB
11 4mbo-a2-m2-cA 307 40 0.1313 0.0423 0.3250 7.0 4mbo-a2-m1-cA_4mbo-a2-m2-cA
12 4mbo-a2-m1-cA 307 40 0.1313 0.0423 0.3250 7.0 4mbo-a2-m1-cA_4mbo-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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