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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
GATSIPGEVAEQAMHWHLELQEPAVSAATLAACMSWRQAHPLHEHAWQRTQVFAQRLREM
R

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5cos-a1-m1-cD 61 61 1.0000 1.0000 1.0000 2.95e-39 5cos-a1-m1-cC_5cos-a1-m1-cD
2 5cos-a1-m1-cC 58 58 0.9508 1.0000 1.0000 6.27e-37 5cos-a1-m1-cC_5cos-a1-m1-cD
3 5cos-a2-m1-cA 56 56 0.9180 1.0000 1.0000 2.17e-35 5cos-a2-m1-cB_5cos-a2-m1-cA
4 5cos-a2-m1-cB 55 55 0.9016 1.0000 1.0000 2.24e-34 5cos-a2-m1-cB_5cos-a2-m1-cA
5 4h8a-a1-m1-cA 337 33 0.1639 0.0297 0.3030 1.3 4h8a-a1-m1-cB_4h8a-a1-m1-cA
6 4h8a-a1-m1-cB 313 33 0.1639 0.0319 0.3030 1.5 4h8a-a1-m1-cB_4h8a-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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