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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=38)
GCASRCMKYNDELEKCEARMMSDCEQELEDLLYCLDHC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6oke-a1-m1-cC 38 38 1.0000 1.0000 1.0000 1.90e-21 6oke-a1-m1-cC_6oke-a1-m1-cD
2 6oke-a1-m1-cB 38 38 1.0000 1.0000 1.0000 1.90e-21 6oke-a1-m1-cB_6oke-a1-m1-cD
3 6oke-a1-m1-cD 43 39 1.0000 0.8837 0.9744 1.21e-19 6oke-a1-m1-cB_6oke-a1-m1-cD, 6oke-a1-m1-cC_6oke-a1-m1-cD
4 3qa8-a2-m1-cF 622 20 0.2632 0.0161 0.5000 2.2 3qa8-a2-m1-cE_3qa8-a2-m1-cF
5 3qa8-a2-m1-cE 622 20 0.2632 0.0161 0.5000 2.2 3qa8-a2-m1-cE_3qa8-a2-m1-cF, 3qa8-a2-m1-cH_3qa8-a2-m1-cE
6 7vop-a1-m1-cb 728 25 0.2368 0.0124 0.3600 8.5 7vop-a1-m1-cd_7vop-a1-m1-cb
7 7vop-a1-m1-cd 683 25 0.2368 0.0132 0.3600 9.5 7vop-a1-m1-cd_7vop-a1-m1-cb

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Reference:
Jacob Schwartz et al.

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