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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
GCEASAFIVNGDKEELFLERVDKLIPTEEGLLLENIFGQRKVIKAKIKRLELVDHRILLE
RE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6fan-a3-m1-cF 62 62 1.0000 1.0000 1.0000 3.54e-38 6fan-a3-m1-cB_6fan-a3-m1-cF
2 6fan-a3-m1-cB 61 61 0.9839 1.0000 1.0000 2.63e-37 6fan-a3-m1-cB_6fan-a3-m1-cF
3 2pyb-a1-m3-cD 151 45 0.2419 0.0993 0.3333 2.7 2pyb-a1-m2-cC_2pyb-a1-m3-cD, 2pyb-a1-m2-cD_2pyb-a1-m3-cD, 2pyb-a1-m3-cC_2pyb-a1-m3-cD
4 2pyb-a1-m3-cC 151 45 0.2419 0.0993 0.3333 2.7 2pyb-a1-m3-cC_2pyb-a1-m3-cD
5 2pyb-a1-m2-cD 151 45 0.2419 0.0993 0.3333 2.7 2pyb-a1-m2-cD_2pyb-a1-m3-cD
6 2pyb-a1-m2-cC 151 45 0.2419 0.0993 0.3333 2.7 2pyb-a1-m2-cC_2pyb-a1-m3-cD
7 7bu3-a1-m1-cA 336 44 0.2419 0.0446 0.3409 3.1 7bu3-a1-m1-cA_7bu3-a1-m1-cB
8 7bu3-a1-m1-cB 337 44 0.2419 0.0445 0.3409 3.1 7bu3-a1-m1-cA_7bu3-a1-m1-cB
9 7bu2-a1-m1-cA 337 44 0.2419 0.0445 0.3409 3.1 7bu2-a1-m1-cA_7bu2-a1-m1-cB
10 7bu2-a1-m1-cB 339 44 0.2419 0.0442 0.3409 3.1 7bu2-a1-m1-cA_7bu2-a1-m1-cB
11 2i3d-a1-m1-cA 213 37 0.2097 0.0610 0.3514 6.5 2i3d-a1-m1-cA_2i3d-a1-m1-cB
12 2i3d-a1-m1-cB 214 37 0.2097 0.0607 0.3514 6.5 2i3d-a1-m1-cA_2i3d-a1-m1-cB
13 1vm7-a1-m1-cA 299 76 0.3387 0.0702 0.2763 9.2 1vm7-a1-m1-cB_1vm7-a1-m1-cA
14 1vm7-a1-m1-cB 297 76 0.3387 0.0707 0.2763 9.3 1vm7-a1-m1-cB_1vm7-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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