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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=44)
GCPAEQRASPLTSIISAVVGILLVVVLGVVFGILIKRRQQKIRK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ob4-a1-m1-cB 44 44 1.0000 1.0000 1.0000 3.44e-24 5ob4-a1-m1-cA_5ob4-a1-m1-cB
2 5ob4-a1-m1-cA 44 44 1.0000 1.0000 1.0000 3.44e-24 5ob4-a1-m1-cA_5ob4-a1-m1-cB
3 2jwa-a1-m1-cB 44 44 1.0000 1.0000 1.0000 3.44e-24 2jwa-a1-m1-cA_2jwa-a1-m1-cB
4 2jwa-a1-m1-cA 44 44 1.0000 1.0000 1.0000 3.44e-24 2jwa-a1-m1-cA_2jwa-a1-m1-cB
5 2n2a-a1-m1-cB 58 41 0.9318 0.7069 1.0000 2.58e-08 2n2a-a1-m1-cA_2n2a-a1-m1-cB
6 2n2a-a1-m1-cA 58 41 0.9318 0.7069 1.0000 2.58e-08 2n2a-a1-m1-cA_2n2a-a1-m1-cB
7 8fws-a1-m1-cD 420 35 0.2045 0.0214 0.2571 4.1 8fws-a1-m1-cA_8fws-a1-m1-cD, 8fws-a1-m1-cC_8fws-a1-m1-cD
8 8fws-a1-m1-cC 420 35 0.2045 0.0214 0.2571 4.1 8fws-a1-m1-cA_8fws-a1-m1-cC, 8fws-a1-m1-cC_8fws-a1-m1-cD
9 8fws-a1-m1-cA 420 35 0.2045 0.0214 0.2571 4.1 8fws-a1-m1-cA_8fws-a1-m1-cC, 8fws-a1-m1-cA_8fws-a1-m1-cD
10 7f5b-a1-m1-cD 420 35 0.2045 0.0214 0.2571 4.1 7f5b-a1-m1-cD_7f5b-a1-m1-cA, 7f5b-a1-m1-cD_7f5b-a1-m1-cC
11 7f5b-a1-m1-cB 433 35 0.2045 0.0208 0.2571 4.1 7f5b-a1-m1-cB_7f5b-a1-m1-cA
12 7f5b-a1-m1-cC 437 35 0.2045 0.0206 0.2571 4.1 7f5b-a1-m1-cD_7f5b-a1-m1-cC
13 7f5b-a1-m1-cA 437 35 0.2045 0.0206 0.2571 4.1 7f5b-a1-m1-cB_7f5b-a1-m1-cA, 7f5b-a1-m1-cD_7f5b-a1-m1-cA
14 8fwq-a1-m1-cD 818 35 0.2045 0.0110 0.2571 4.1 8fwq-a1-m1-cB_8fwq-a1-m1-cD, 8fwq-a1-m1-cC_8fwq-a1-m1-cD
15 8fwq-a1-m1-cC 818 35 0.2045 0.0110 0.2571 4.1 8fwq-a1-m1-cC_8fwq-a1-m1-cD
16 8fwq-a1-m1-cB 818 35 0.2045 0.0110 0.2571 4.1 8fwq-a1-m1-cB_8fwq-a1-m1-cD
17 7f5a-a1-m1-cD 818 35 0.2045 0.0110 0.2571 4.1 7f5a-a1-m1-cB_7f5a-a1-m1-cD, 7f5a-a1-m1-cD_7f5a-a1-m1-cC
18 7f5a-a1-m1-cB 818 35 0.2045 0.0110 0.2571 4.1 7f5a-a1-m1-cB_7f5a-a1-m1-cC, 7f5a-a1-m1-cB_7f5a-a1-m1-cD
19 7f57-a1-m1-cD 818 35 0.2045 0.0110 0.2571 4.1 7f57-a1-m1-cD_7f57-a1-m1-cA
20 7f56-a1-m1-cD 818 35 0.2045 0.0110 0.2571 4.1 7f56-a1-m1-cD_7f56-a1-m1-cB, 7f56-a1-m1-cD_7f56-a1-m1-cC
21 7f56-a1-m1-cB 831 35 0.2045 0.0108 0.2571 4.1 7f56-a1-m1-cA_7f56-a1-m1-cB, 7f56-a1-m1-cB_7f56-a1-m1-cC, 7f56-a1-m1-cD_7f56-a1-m1-cB
22 7f56-a1-m1-cA 831 35 0.2045 0.0108 0.2571 4.1 7f56-a1-m1-cA_7f56-a1-m1-cB
23 7f5a-a1-m1-cC 835 35 0.2045 0.0108 0.2571 4.1 7f5a-a1-m1-cB_7f5a-a1-m1-cC, 7f5a-a1-m1-cD_7f5a-a1-m1-cC
24 7f57-a1-m1-cA 835 35 0.2045 0.0108 0.2571 4.1 7f57-a1-m1-cD_7f57-a1-m1-cA
25 7f56-a1-m1-cC 835 35 0.2045 0.0108 0.2571 4.1 7f56-a1-m1-cB_7f56-a1-m1-cC, 7f56-a1-m1-cD_7f56-a1-m1-cC
26 5lil-a1-m1-cA 615 25 0.2727 0.0195 0.4800 4.5 5lil-a1-m1-cB_5lil-a1-m1-cA
27 5lil-a1-m1-cB 604 22 0.2500 0.0182 0.5000 9.5 5lil-a1-m1-cB_5lil-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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