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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
GCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTYDKILKNLSKVGQACCRPIAF
DDDLSFLDDNLVYHILRKHSAKRCGC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6q2n-a1-m1-cB 86 86 1.0000 1.0000 1.0000 9.99e-60 6q2n-a1-m1-cA_6q2n-a1-m1-cB
2 6q2n-a1-m1-cA 86 86 1.0000 1.0000 1.0000 9.99e-60 6q2n-a1-m1-cA_6q2n-a1-m1-cB
3 3fub-a1-m2-cB 92 91 1.0000 0.9348 0.9451 2.61e-57 3fub-a1-m1-cB_3fub-a1-m2-cB
4 3fub-a1-m1-cB 92 91 1.0000 0.9348 0.9451 2.61e-57 3fub-a1-m1-cB_3fub-a1-m2-cB
5 1agq-a1-m1-cA 91 88 0.9419 0.8901 0.9205 4.83e-45 1agq-a1-m1-cA_1agq-a1-m1-cB
6 1agq-a1-m1-cB 96 92 0.9419 0.8438 0.8804 1.32e-44 1agq-a1-m1-cA_1agq-a1-m1-cB
7 7ab8-a1-m2-cB 98 94 0.7326 0.6429 0.6702 2.84e-40 7ab8-a1-m1-cB_7ab8-a1-m2-cB
8 7ab8-a1-m1-cB 98 94 0.7326 0.6429 0.6702 2.84e-40 7ab8-a1-m1-cB_7ab8-a1-m2-cB
9 5nmz-a1-m1-cB 99 94 0.4302 0.3737 0.3936 3.65e-20 5nmz-a1-m1-cB_5nmz-a1-m1-cA
10 5nmz-a1-m1-cA 101 94 0.4302 0.3663 0.3936 4.15e-20 5nmz-a1-m1-cB_5nmz-a1-m1-cA
11 2ask-a3-m3-cB 101 98 0.4070 0.3465 0.3571 3.76e-14 2ask-a3-m3-cA_2ask-a3-m3-cB
12 2ask-a3-m3-cA 101 98 0.4070 0.3465 0.3571 3.76e-14 2ask-a3-m3-cA_2ask-a3-m3-cB
13 2ask-a2-m2-cB 101 98 0.4070 0.3465 0.3571 3.76e-14 2ask-a2-m1-cA_2ask-a2-m2-cB
14 2ask-a2-m1-cA 101 98 0.4070 0.3465 0.3571 3.76e-14 2ask-a2-m1-cA_2ask-a2-m2-cB
15 5z0b-a1-m1-cC 531 39 0.1395 0.0226 0.3077 1.8 5z0b-a1-m1-cC_5z0b-a1-m1-cA, 5z0b-a1-m1-cC_5z0b-a1-m1-cB
16 5z0b-a1-m1-cB 580 39 0.1395 0.0207 0.3077 2.0 5z0b-a1-m1-cC_5z0b-a1-m1-cB
17 5z0b-a1-m1-cA 580 39 0.1395 0.0207 0.3077 2.0 5z0b-a1-m1-cC_5z0b-a1-m1-cA
18 3jqz-a1-m1-cB 582 39 0.1395 0.0206 0.3077 2.1 3jqz-a1-m1-cA_3jqz-a1-m1-cB
19 3jqz-a1-m1-cA 582 39 0.1395 0.0206 0.3077 2.1 3jqz-a1-m1-cA_3jqz-a1-m1-cB
20 4g03-a3-m1-cB 578 39 0.1395 0.0208 0.3077 2.1 4g03-a3-m1-cA_4g03-a3-m1-cB
21 4g03-a3-m1-cA 578 39 0.1395 0.0208 0.3077 2.1 4g03-a3-m1-cA_4g03-a3-m1-cB
22 4k71-a3-m2-cA 583 39 0.1395 0.0206 0.3077 2.2 4k71-a3-m1-cA_4k71-a3-m2-cA
23 4k71-a3-m1-cA 583 39 0.1395 0.0206 0.3077 2.2 4k71-a3-m1-cA_4k71-a3-m2-cA
24 8fnu-a1-m1-cG 796 43 0.1744 0.0188 0.3488 2.4 8fnu-a1-m1-cF_8fnu-a1-m1-cG
25 8fnu-a1-m1-cF 796 43 0.1744 0.0188 0.3488 2.4 8fnu-a1-m1-cF_8fnu-a1-m1-cG
26 6sf3-a1-m2-cB 104 46 0.1628 0.1346 0.3043 2.6 6sf3-a1-m1-cB_6sf3-a1-m2-cB
27 6sf3-a1-m1-cB 104 46 0.1628 0.1346 0.3043 2.6 6sf3-a1-m1-cB_6sf3-a1-m2-cB
28 6gyr-a2-m1-cB 583 43 0.1395 0.0206 0.2791 3.2 6gyr-a2-m1-cB_6gyr-a2-m1-cD
29 6gyr-a2-m1-cD 584 43 0.1395 0.0205 0.2791 3.2 6gyr-a2-m1-cB_6gyr-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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