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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
GCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTYDKILKNLSRNRRLKVGQACC
RPIAFDDDLSFLDDNLVYHILRKHSAKRCGCI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3fub-a1-m2-cB 92 92 1.0000 1.0000 1.0000 2.84e-64 3fub-a1-m1-cB_3fub-a1-m2-cB
2 3fub-a1-m1-cB 92 92 1.0000 1.0000 1.0000 2.84e-64 3fub-a1-m1-cB_3fub-a1-m2-cB
3 6q2n-a1-m1-cB 86 91 0.9348 1.0000 0.9451 2.79e-57 6q2n-a1-m1-cA_6q2n-a1-m1-cB
4 6q2n-a1-m1-cA 86 91 0.9348 1.0000 0.9451 2.79e-57 6q2n-a1-m1-cA_6q2n-a1-m1-cB
5 1agq-a1-m1-cB 96 93 0.9348 0.8958 0.9247 1.08e-48 1agq-a1-m1-cA_1agq-a1-m1-cB
6 1agq-a1-m1-cA 91 92 0.9130 0.9231 0.9130 6.72e-47 1agq-a1-m1-cA_1agq-a1-m1-cB
7 7ab8-a1-m2-cB 98 95 0.7065 0.6633 0.6842 1.51e-43 7ab8-a1-m1-cB_7ab8-a1-m2-cB
8 7ab8-a1-m1-cB 98 95 0.7065 0.6633 0.6842 1.51e-43 7ab8-a1-m1-cB_7ab8-a1-m2-cB
9 5nmz-a1-m1-cB 99 95 0.4022 0.3737 0.3895 1.44e-20 5nmz-a1-m1-cB_5nmz-a1-m1-cA
10 5nmz-a1-m1-cA 101 95 0.4022 0.3663 0.3895 1.57e-20 5nmz-a1-m1-cB_5nmz-a1-m1-cA
11 2ask-a3-m3-cB 101 99 0.3913 0.3564 0.3636 4.82e-14 2ask-a3-m3-cA_2ask-a3-m3-cB
12 2ask-a3-m3-cA 101 99 0.3913 0.3564 0.3636 4.82e-14 2ask-a3-m3-cA_2ask-a3-m3-cB
13 2ask-a2-m2-cB 101 99 0.3913 0.3564 0.3636 4.82e-14 2ask-a2-m1-cA_2ask-a2-m2-cB
14 2ask-a2-m1-cA 101 99 0.3913 0.3564 0.3636 4.82e-14 2ask-a2-m1-cA_2ask-a2-m2-cB
15 4mid-a1-m2-cA 105 73 0.2065 0.1810 0.2603 0.36 4mid-a1-m1-cA_4mid-a1-m2-cA
16 4mid-a1-m1-cA 105 73 0.2065 0.1810 0.2603 0.36 4mid-a1-m1-cA_4mid-a1-m2-cA
17 3rfz-a3-m1-cB 778 31 0.1413 0.0167 0.4194 7.0 3rfz-a3-m1-cB_3rfz-a3-m2-cE
18 8fnu-a1-m1-cG 796 31 0.1304 0.0151 0.3871 7.2 8fnu-a1-m1-cF_8fnu-a1-m1-cG
19 8fnu-a1-m1-cF 796 31 0.1304 0.0151 0.3871 7.2 8fnu-a1-m1-cF_8fnu-a1-m1-cG
20 2qkp-a2-m1-cD 134 45 0.1522 0.1045 0.3111 9.6 2qkp-a2-m1-cD_2qkp-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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