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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
GDAAAGKAKSVMCAACHGAAGVSAVPTYPNLAGQKEAYLTKQLNDFKSGKRNDPTMKGMV
MALSPADMENLAAYYANM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4o1w-a3-m1-cF 78 78 1.0000 1.0000 1.0000 6.52e-53 4o1w-a3-m1-cF_4o1w-a3-m1-cE
2 4o1w-a3-m1-cE 79 78 1.0000 0.9873 1.0000 6.79e-53 4o1w-a3-m1-cF_4o1w-a3-m1-cE
3 1cno-a1-m1-cB 86 64 0.4615 0.4186 0.5625 2.01e-18 1cno-a1-m1-cA_1cno-a1-m1-cB
4 1cno-a1-m1-cA 86 64 0.4615 0.4186 0.5625 2.01e-18 1cno-a1-m1-cA_1cno-a1-m1-cB
5 5lo9-a1-m1-cB 469 79 0.3846 0.0640 0.3797 1.08e-08 5lo9-a1-m1-cB_5lo9-a1-m1-cA
6 5lo9-a1-m1-cB 469 89 0.4359 0.0725 0.3820 5.23e-05 5lo9-a1-m1-cB_5lo9-a1-m1-cA
7 5lo9-a1-m1-cA 471 79 0.3846 0.0637 0.3797 1.15e-08 5lo9-a1-m1-cB_5lo9-a1-m1-cA
8 5lo9-a1-m1-cA 471 89 0.4359 0.0722 0.3820 5.34e-05 5lo9-a1-m1-cB_5lo9-a1-m1-cA
9 4rlr-a2-m2-cA 126 32 0.1667 0.1032 0.4062 0.49 4rlr-a2-m1-cA_4rlr-a2-m2-cA
10 4rlr-a2-m1-cA 126 32 0.1667 0.1032 0.4062 0.49 4rlr-a2-m1-cA_4rlr-a2-m2-cA
11 3hn6-a1-m1-cD 270 43 0.1538 0.0444 0.2791 3.3 3hn6-a1-m1-cB_3hn6-a1-m1-cD, 3hn6-a1-m1-cD_3hn6-a1-m1-cA
12 3hn6-a1-m1-cB 270 43 0.1538 0.0444 0.2791 3.3 3hn6-a1-m1-cB_3hn6-a1-m1-cD
13 3hn6-a1-m1-cA 271 43 0.1538 0.0443 0.2791 3.3 3hn6-a1-m1-cD_3hn6-a1-m1-cA
14 5h0i-a1-m1-cB 400 48 0.2179 0.0425 0.3542 5.3 5h0i-a1-m1-cA_5h0i-a1-m1-cB
15 5h0i-a1-m1-cA 400 48 0.2179 0.0425 0.3542 5.6 5h0i-a1-m1-cA_5h0i-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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