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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
GDKLKNEVEQLAPEEQEILTAIYTGITSLELPGMMGMDIDEVEKVLEKLIDQGFLDLVRI
RKETDLTEKGRAVTNFIITNF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7od9-a1-m1-cC 90 81 1.0000 0.9000 1.0000 7.92e-54 7od9-a1-m1-cF_7od9-a1-m1-cC
2 7od9-a1-m1-cF 81 81 1.0000 1.0000 1.0000 2.11e-53 7od9-a1-m1-cF_7od9-a1-m1-cC
3 7ovp-a1-m1-cB 329 62 0.3457 0.0851 0.4516 1.90e-09 7ovp-a1-m1-cA_7ovp-a1-m1-cB
4 7ovp-a1-m1-cA 329 62 0.3457 0.0851 0.4516 1.90e-09 7ovp-a1-m1-cA_7ovp-a1-m1-cB
5 3i71-a4-m2-cB 58 38 0.1358 0.1897 0.2895 0.38 3i71-a4-m1-cB_3i71-a4-m2-cB
6 3i71-a4-m1-cB 58 38 0.1358 0.1897 0.2895 0.38 3i71-a4-m1-cB_3i71-a4-m2-cB
7 3i71-a2-m1-cB 58 38 0.1358 0.1897 0.2895 0.38 3i71-a2-m1-cA_3i71-a2-m1-cB
8 3i71-a2-m1-cA 56 38 0.1358 0.1964 0.2895 0.40 3i71-a2-m1-cA_3i71-a2-m1-cB
9 7dvn-a1-m2-cA 135 48 0.1728 0.1037 0.2917 0.54 7dvn-a1-m1-cA_7dvn-a1-m2-cA
10 7dvn-a1-m1-cA 135 48 0.1728 0.1037 0.2917 0.54 7dvn-a1-m1-cA_7dvn-a1-m2-cA
11 3s2w-a1-m1-cB 133 49 0.1728 0.1053 0.2857 1.2 3s2w-a1-m1-cB_3s2w-a1-m1-cA
12 2xwp-a1-m6-cA 257 43 0.1605 0.0506 0.3023 2.1 2xwp-a1-m2-cA_2xwp-a1-m6-cA, 2xwp-a1-m3-cA_2xwp-a1-m6-cA, 2xwp-a1-m5-cA_2xwp-a1-m6-cA
13 2xwp-a1-m5-cA 257 43 0.1605 0.0506 0.3023 2.1 2xwp-a1-m5-cA_2xwp-a1-m6-cA
14 2xwp-a1-m3-cA 257 43 0.1605 0.0506 0.3023 2.1 2xwp-a1-m3-cA_2xwp-a1-m6-cA
15 2xwp-a1-m2-cA 257 43 0.1605 0.0506 0.3023 2.1 2xwp-a1-m2-cA_2xwp-a1-m6-cA
16 6gp3-a1-m1-cA 318 57 0.2099 0.0535 0.2982 3.9 6gp3-a1-m1-cB_6gp3-a1-m1-cA
17 6gp3-a1-m1-cB 313 57 0.2099 0.0543 0.2982 4.2 6gp3-a1-m1-cB_6gp3-a1-m1-cA
18 2bho-a1-m2-cA 110 19 0.1111 0.0818 0.4737 4.7 2bho-a1-m1-cA_2bho-a1-m2-cA
19 2bho-a1-m1-cA 110 19 0.1111 0.0818 0.4737 4.7 2bho-a1-m1-cA_2bho-a1-m2-cA
20 3fj1-a2-m1-cC 322 23 0.0988 0.0248 0.3478 4.9 3fj1-a2-m1-cC_3fj1-a2-m1-cD
21 3fj1-a2-m1-cD 326 23 0.0988 0.0245 0.3478 4.9 3fj1-a2-m1-cC_3fj1-a2-m1-cD
22 4nmd-a1-m1-cA 979 62 0.2346 0.0194 0.3065 8.1 4nmd-a1-m1-cA_4nmd-a1-m1-cB
23 4nmd-a1-m1-cB 980 62 0.2346 0.0194 0.3065 8.1 4nmd-a1-m1-cA_4nmd-a1-m1-cB
24 3jb9-a1-m1-cU 430 59 0.2222 0.0419 0.3051 8.8 3jb9-a1-m1-cS_3jb9-a1-m1-cU, 3jb9-a1-m1-cV_3jb9-a1-m1-cU
25 6j0e-a1-m1-cB 125 63 0.2222 0.1440 0.2857 9.0 6j0e-a1-m1-cA_6j0e-a1-m1-cB
26 6j0e-a1-m1-cA 124 63 0.2222 0.1452 0.2857 9.4 6j0e-a1-m1-cA_6j0e-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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