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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
GDLQCLCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQALLYKKIIK
EHLES

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4hsv-a1-m1-cD 65 65 1.0000 1.0000 1.0000 1.34e-42 4hsv-a1-m1-cA_4hsv-a1-m1-cD, 4hsv-a1-m1-cC_4hsv-a1-m1-cD
2 4hsv-a1-m1-cA 65 65 1.0000 1.0000 1.0000 1.34e-42 4hsv-a1-m1-cA_4hsv-a1-m1-cD
3 4r9y-a1-m1-cD 65 65 0.9538 0.9538 0.9538 2.59e-39 4r9y-a1-m1-cB_4r9y-a1-m1-cD
4 4r9y-a1-m1-cB 65 65 0.9538 0.9538 0.9538 2.59e-39 4r9y-a1-m1-cB_4r9y-a1-m1-cD
5 4r9w-a1-m2-cB 64 64 0.9385 0.9531 0.9531 2.37e-38 4r9w-a1-m1-cA_4r9w-a1-m2-cB, 4r9w-a1-m2-cA_4r9w-a1-m2-cB
6 4hsv-a1-m1-cC 59 59 0.9077 1.0000 1.0000 5.76e-38 4hsv-a1-m1-cC_4hsv-a1-m1-cD
7 1f9q-a1-m1-cC 62 62 0.9077 0.9516 0.9516 7.97e-37 1f9q-a1-m1-cB_1f9q-a1-m1-cC
8 1f9q-a1-m1-cB 62 62 0.9077 0.9516 0.9516 7.97e-37 1f9q-a1-m1-cB_1f9q-a1-m1-cC
9 4r9w-a1-m2-cA 62 62 0.9077 0.9516 0.9516 1.18e-36 4r9w-a1-m2-cA_4r9w-a1-m2-cB
10 4r9w-a1-m1-cA 62 62 0.9077 0.9516 0.9516 1.18e-36 4r9w-a1-m1-cA_4r9w-a1-m2-cB
11 1pfn-a1-m1-cD 68 64 0.8923 0.8529 0.9062 2.33e-36 1pfn-a1-m1-cB_1pfn-a1-m1-cD
12 1pfn-a1-m1-cC 68 64 0.8923 0.8529 0.9062 2.33e-36 1pfn-a1-m1-cB_1pfn-a1-m1-cC
13 1pfn-a1-m1-cB 68 64 0.8923 0.8529 0.9062 2.33e-36 1pfn-a1-m1-cB_1pfn-a1-m1-cC, 1pfn-a1-m1-cB_1pfn-a1-m1-cD
14 1plf-a1-m1-cD 65 64 0.7231 0.7231 0.7344 1.86e-27 1plf-a1-m1-cA_1plf-a1-m1-cD, 1plf-a1-m1-cB_1plf-a1-m1-cD, 1plf-a1-m1-cC_1plf-a1-m1-cD
15 1plf-a1-m1-cB 65 64 0.7231 0.7231 0.7344 1.86e-27 1plf-a1-m1-cB_1plf-a1-m1-cD
16 1plf-a1-m1-cC 63 63 0.7077 0.7302 0.7302 2.07e-26 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cC_1plf-a1-m1-cD
17 1plf-a1-m1-cA 63 63 0.7077 0.7302 0.7302 2.07e-26 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cA_1plf-a1-m1-cD
18 1tvx-a1-m1-cD 71 63 0.5385 0.4930 0.5556 8.40e-19 1tvx-a1-m1-cB_1tvx-a1-m1-cD, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
19 1tvx-a1-m1-cB 71 63 0.5385 0.4930 0.5556 8.40e-19 1tvx-a1-m1-cB_1tvx-a1-m1-cD
20 1tvx-a1-m1-cC 64 61 0.5385 0.5469 0.5738 1.44e-18 1tvx-a1-m1-cA_1tvx-a1-m1-cC, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
21 1tvx-a1-m1-cA 64 61 0.5385 0.5469 0.5738 1.44e-18 1tvx-a1-m1-cA_1tvx-a1-m1-cC
22 2mgs-a1-m1-cB 71 64 0.4154 0.3803 0.4219 6.95e-16 2mgs-a1-m1-cA_2mgs-a1-m1-cB
23 2mgs-a1-m1-cA 71 64 0.4154 0.3803 0.4219 6.95e-16 2mgs-a1-m1-cA_2mgs-a1-m1-cB
24 1msh-a1-m1-cB 72 64 0.4462 0.4028 0.4531 5.90e-15 1msh-a1-m1-cA_1msh-a1-m1-cB
25 1msh-a1-m1-cA 72 64 0.4462 0.4028 0.4531 5.90e-15 1msh-a1-m1-cA_1msh-a1-m1-cB
26 1mi2-a1-m1-cB 73 63 0.4615 0.4110 0.4762 2.99e-14 1mi2-a1-m1-cA_1mi2-a1-m1-cB
27 1mi2-a1-m1-cA 73 63 0.4615 0.4110 0.4762 2.99e-14 1mi2-a1-m1-cA_1mi2-a1-m1-cB
28 3n52-a3-m1-cB 71 63 0.4615 0.4225 0.4762 3.14e-14 3n52-a3-m1-cD_3n52-a3-m1-cB
29 3n52-a3-m1-cD 70 63 0.4615 0.4286 0.4762 3.20e-14 3n52-a3-m1-cC_3n52-a3-m1-cD, 3n52-a3-m1-cD_3n52-a3-m1-cB
30 3n52-a3-m1-cC 67 63 0.4615 0.4478 0.4762 3.32e-14 3n52-a3-m1-cC_3n52-a3-m1-cD
31 1rod-a1-m1-cB 72 65 0.4308 0.3889 0.4308 1.32e-13 1rod-a1-m1-cA_1rod-a1-m1-cB
32 1rod-a1-m1-cA 72 65 0.4308 0.3889 0.4308 1.32e-13 1rod-a1-m1-cA_1rod-a1-m1-cB
33 6wzj-a1-m1-cE 63 63 0.4154 0.4286 0.4286 3.04e-13 6wzj-a1-m1-cF_6wzj-a1-m1-cE
34 6wzk-a1-m1-cF 64 63 0.4000 0.4062 0.4127 3.70e-12 6wzk-a1-m1-cE_6wzk-a1-m1-cF
35 6wzk-a1-m1-cE 64 63 0.4000 0.4062 0.4127 3.70e-12 6wzk-a1-m1-cE_6wzk-a1-m1-cF
36 6wzj-a1-m1-cF 59 62 0.4154 0.4576 0.4355 1.56e-10 6wzj-a1-m1-cF_6wzj-a1-m1-cE
37 1qe6-a3-m1-cD 72 63 0.3231 0.2917 0.3333 2.92e-09 1qe6-a3-m2-cB_1qe6-a3-m1-cD
38 1qe6-a3-m2-cB 71 63 0.3231 0.2958 0.3333 2.95e-09 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
39 1qe6-a3-m2-cA 68 62 0.3231 0.3088 0.3387 3.54e-09 1qe6-a3-m2-cA_1qe6-a3-m2-cB
40 1o7y-a1-m1-cC 63 60 0.3385 0.3492 0.3667 3.01e-07 1o7y-a1-m1-cB_1o7y-a1-m1-cC, 1o7y-a1-m1-cC_1o7y-a1-m1-cA, 1o7y-a1-m1-cD_1o7y-a1-m1-cC
41 1o7y-a1-m1-cA 67 60 0.3385 0.3284 0.3667 3.59e-07 1o7y-a1-m1-cC_1o7y-a1-m1-cA
42 1o7y-a1-m1-cD 62 59 0.3385 0.3548 0.3729 4.23e-07 1o7y-a1-m1-cD_1o7y-a1-m1-cC
43 1o7y-a1-m1-cB 62 58 0.3385 0.3548 0.3793 6.12e-07 1o7y-a1-m1-cB_1o7y-a1-m1-cC
44 2r3z-a1-m1-cD 64 60 0.3231 0.3281 0.3500 5.70e-04 2r3z-a1-m1-cD_2r3z-a1-m1-cA
45 2r3z-a1-m1-cA 68 60 0.3231 0.3088 0.3500 6.94e-04 2r3z-a1-m1-cB_2r3z-a1-m1-cA, 2r3z-a1-m1-cD_2r3z-a1-m1-cA
46 2r3z-a1-m1-cB 67 60 0.3231 0.3134 0.3500 7.42e-04 2r3z-a1-m1-cB_2r3z-a1-m1-cA
47 4mhe-a2-m1-cB 69 57 0.2615 0.2464 0.2982 0.027 4mhe-a2-m1-cC_4mhe-a2-m1-cB
48 4mhe-a2-m1-cC 61 57 0.2615 0.2787 0.2982 0.030 4mhe-a2-m1-cC_4mhe-a2-m1-cB
49 3wvr-a2-m1-cB 426 32 0.1692 0.0258 0.3438 1.1 3wvr-a2-m1-cB_3wvr-a2-m1-cC
50 3wvr-a2-m1-cC 429 32 0.1692 0.0256 0.3438 1.1 3wvr-a2-m1-cB_3wvr-a2-m1-cC
51 2boy-a4-m1-cD 251 21 0.1538 0.0398 0.4762 4.4 2boy-a4-m1-cH_2boy-a4-m1-cD
52 4xc6-a1-m1-cB 1061 25 0.1692 0.0104 0.4400 5.1 4xc6-a1-m1-cB_4xc6-a1-m1-cA
53 4xc6-a1-m1-cA 1067 25 0.1692 0.0103 0.4400 5.1 4xc6-a1-m1-cB_4xc6-a1-m1-cA
54 6r72-a2-m1-cC 565 19 0.1692 0.0195 0.5789 5.4 6r72-a2-m1-cC_6r72-a2-m1-cD
55 6r72-a2-m1-cD 572 19 0.1692 0.0192 0.5789 5.4 6r72-a2-m1-cC_6r72-a2-m1-cD
56 2xs6-a1-m2-cA 166 16 0.1385 0.0542 0.5625 8.3 2xs6-a1-m1-cA_2xs6-a1-m2-cA
57 2xs6-a1-m1-cA 166 16 0.1385 0.0542 0.5625 8.3 2xs6-a1-m1-cA_2xs6-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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