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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=33)
GDPKVVETYVELLKRHEKAVKELLEIAKTHAKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6dlc-a1-m2-cB 33 33 1.0000 1.0000 1.0000 1.06e-16 6dlc-a1-m1-cB_6dlc-a1-m2-cB
2 6dlc-a1-m1-cB 33 33 1.0000 1.0000 1.0000 1.06e-16 6dlc-a1-m1-cB_6dlc-a1-m2-cB
3 6xns-a2-m1-cE 326 30 0.7879 0.0798 0.8667 2.52e-11 6xns-a2-m1-cE_6xns-a2-m1-cF
4 6xns-a2-m1-cF 327 30 0.7879 0.0795 0.8667 2.73e-11 6xns-a2-m1-cE_6xns-a2-m1-cF
5 6e9z-a1-m1-cI 225 25 0.4242 0.0622 0.5600 5.3 6e9z-a1-m1-cH_6e9z-a1-m1-cI
6 6e9z-a1-m1-cH 225 25 0.4242 0.0622 0.5600 5.3 6e9z-a1-m1-cA_6e9z-a1-m1-cH, 6e9z-a1-m1-cH_6e9z-a1-m1-cI
7 6e9z-a1-m1-cA 225 25 0.4242 0.0622 0.5600 5.3 6e9z-a1-m1-cA_6e9z-a1-m1-cH
8 1eke-a1-m1-cB 222 32 0.3636 0.0541 0.3750 7.5 1eke-a1-m1-cA_1eke-a1-m1-cB
9 1eke-a1-m1-cA 219 32 0.3636 0.0548 0.3750 8.0 1eke-a1-m1-cA_1eke-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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