Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
GDTTITIVGNLTADPELRFTPSGAAVANFTVASTPREALFLRCNIWREAAENVAESLTRG
ARVIVSGRLKQRSTVIEVEVDEIGPSLRYATAKVN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ue7-a2-m3-cD 95 95 1.0000 1.0000 1.0000 1.37e-64 1ue7-a2-m1-cD_1ue7-a2-m3-cD
2 1ue7-a2-m1-cD 95 95 1.0000 1.0000 1.0000 1.37e-64 1ue7-a2-m1-cD_1ue7-a2-m3-cD
3 1ue7-a1-m2-cB 98 95 0.9789 0.9490 0.9789 4.76e-61 1ue7-a1-m2-cB_1ue7-a1-m1-cA, 1ue7-a1-m2-cB_1ue7-a1-m2-cA
4 7f5y-a1-m2-cA 109 104 1.0000 0.8716 0.9135 6.04e-60 7f5y-a1-m2-cA_7f5y-a1-m2-cB
5 1ue7-a1-m2-cA 106 101 0.9895 0.8868 0.9307 1.90e-59 1ue7-a1-m2-cB_1ue7-a1-m2-cA
6 1ue7-a1-m1-cA 106 101 0.9895 0.8868 0.9307 1.90e-59 1ue7-a1-m2-cB_1ue7-a1-m1-cA
7 1ue1-a1-m2-cB 119 113 1.0000 0.7983 0.8407 2.75e-58 1ue1-a1-m1-cB_1ue1-a1-m2-cB
8 1ue1-a1-m1-cB 119 113 1.0000 0.7983 0.8407 2.75e-58 1ue1-a1-m1-cB_1ue1-a1-m2-cB
9 7f5z-a1-m2-cB 118 114 1.0000 0.8051 0.8333 3.54e-58 7f5z-a1-m1-cB_7f5z-a1-m2-cB, 7f5z-a1-m2-cA_7f5z-a1-m2-cB
10 7f5z-a1-m1-cB 118 114 1.0000 0.8051 0.8333 3.54e-58 7f5z-a1-m1-cB_7f5z-a1-m2-cB
11 7f5z-a1-m2-cA 117 114 1.0000 0.8120 0.8333 4.18e-58 7f5z-a1-m2-cA_7f5z-a1-m2-cB
12 7f5y-a1-m2-cB 120 116 1.0000 0.7917 0.8190 9.48e-58 7f5y-a1-m2-cA_7f5y-a1-m2-cB
13 1x3e-a1-m2-cA 110 108 0.9579 0.8273 0.8426 1.03e-57 1x3e-a1-m1-cA_1x3e-a1-m2-cA, 1x3e-a1-m2-cA_1x3e-a1-m2-cB
14 1x3e-a1-m1-cA 110 108 0.9579 0.8273 0.8426 1.03e-57 1x3e-a1-m1-cA_1x3e-a1-m2-cA
15 3a5u-a1-m2-cB 112 109 0.9579 0.8125 0.8349 1.42e-57 3a5u-a1-m2-cB_3a5u-a1-m2-cA
16 3a5u-a1-m2-cA 118 115 0.9579 0.7712 0.7913 1.32e-56 3a5u-a1-m1-cA_3a5u-a1-m2-cA, 3a5u-a1-m2-cB_3a5u-a1-m2-cA
17 3a5u-a1-m1-cA 118 115 0.9579 0.7712 0.7913 1.32e-56 3a5u-a1-m1-cA_3a5u-a1-m2-cA
18 1x3e-a1-m2-cB 119 116 0.9579 0.7647 0.7845 2.39e-56 1x3e-a1-m2-cA_1x3e-a1-m2-cB
19 3eiv-a3-m1-cD 100 96 0.7684 0.7300 0.7604 2.76e-47 3eiv-a3-m1-cD_3eiv-a3-m1-cC
20 3eiv-a1-m1-cD 100 96 0.7684 0.7300 0.7604 2.76e-47 3eiv-a1-m1-cA_3eiv-a1-m1-cD
21 3eiv-a2-m1-cB 111 106 0.7684 0.6577 0.6887 4.46e-44 3eiv-a2-m1-cA_3eiv-a2-m1-cB
22 3eiv-a3-m1-cC 111 107 0.7684 0.6577 0.6822 1.13e-43 3eiv-a3-m1-cD_3eiv-a3-m1-cC
23 3eiv-a2-m1-cA 98 95 0.7474 0.7245 0.7474 1.18e-43 3eiv-a2-m1-cA_3eiv-a2-m1-cB
24 3eiv-a1-m1-cA 98 95 0.7474 0.7245 0.7474 1.18e-43 3eiv-a1-m1-cA_3eiv-a1-m1-cD
25 6bhx-a1-m1-cC 102 90 0.4526 0.4216 0.4778 2.33e-19 6bhx-a1-m1-cA_6bhx-a1-m1-cC
26 6bhw-a2-m1-cE 99 72 0.4000 0.3838 0.5278 6.02e-19 6bhw-a2-m1-cE_6bhw-a2-m1-cG, 6bhw-a2-m1-cF_6bhw-a2-m1-cE
27 6bhx-a1-m1-cA 98 86 0.4421 0.4286 0.4884 7.21e-19 6bhx-a1-m1-cA_6bhx-a1-m1-cC
28 6bhw-a2-m1-cG 101 74 0.4000 0.3762 0.5135 1.39e-18 6bhw-a2-m1-cE_6bhw-a2-m1-cG
29 6bhw-a2-m1-cF 96 89 0.4316 0.4271 0.4607 5.03e-18 6bhw-a2-m1-cF_6bhw-a2-m1-cE
30 3vdy-a1-m1-cA 101 87 0.3895 0.3663 0.4253 5.33e-17 3vdy-a1-m2-cB_3vdy-a1-m1-cA
31 3vdy-a1-m2-cB 97 88 0.3895 0.3814 0.4205 3.01e-15 3vdy-a1-m1-cB_3vdy-a1-m2-cB, 3vdy-a1-m2-cB_3vdy-a1-m1-cA
32 3vdy-a1-m1-cB 97 88 0.3895 0.3814 0.4205 3.01e-15 3vdy-a1-m1-cB_3vdy-a1-m2-cB
33 5xgt-a1-m1-cA 104 77 0.3474 0.3173 0.4286 3.13e-14 5xgt-a1-m1-cA_5xgt-a1-m1-cB
34 5xgt-a1-m1-cB 105 77 0.3474 0.3143 0.4286 3.94e-14 5xgt-a1-m1-cA_5xgt-a1-m1-cB
35 7d8j-a1-m2-cB 98 84 0.3579 0.3469 0.4048 1.34e-13 7d8j-a1-m2-cB_7d8j-a1-m1-cA, 7d8j-a1-m2-cB_7d8j-a1-m2-cA
36 7d8j-a1-m2-cA 112 77 0.3263 0.2768 0.4026 1.84e-12 7d8j-a1-m1-cA_7d8j-a1-m2-cA, 7d8j-a1-m2-cB_7d8j-a1-m2-cA
37 7d8j-a1-m1-cA 112 77 0.3263 0.2768 0.4026 1.84e-12 7d8j-a1-m1-cA_7d8j-a1-m2-cA, 7d8j-a1-m2-cB_7d8j-a1-m1-cA
38 3tqy-a1-m1-cD 96 74 0.3053 0.3021 0.3919 6.75e-12 3tqy-a1-m1-cD_3tqy-a1-m1-cC
39 2fxq-a1-m2-cA 197 65 0.3053 0.1472 0.4462 1.60e-11 2fxq-a1-m1-cA_2fxq-a1-m2-cA
40 2fxq-a1-m2-cA 197 95 0.3053 0.1472 0.3053 1.96e-06 2fxq-a1-m1-cA_2fxq-a1-m2-cA
41 2fxq-a1-m1-cA 197 65 0.3053 0.1472 0.4462 1.60e-11 2fxq-a1-m1-cA_2fxq-a1-m2-cA
42 2fxq-a1-m1-cA 197 95 0.3053 0.1472 0.3053 1.96e-06 2fxq-a1-m1-cA_2fxq-a1-m2-cA
43 1sru-a1-m1-cA 100 75 0.2842 0.2700 0.3600 3.67e-11 1sru-a1-m1-cA_1sru-a1-m1-cD, 1sru-a1-m1-cC_1sru-a1-m1-cA
44 1sru-a1-m1-cD 101 74 0.2842 0.2673 0.3649 3.71e-11 1sru-a1-m1-cA_1sru-a1-m1-cD
45 2ihf-a1-m2-cA 205 67 0.2947 0.1366 0.4179 7.95e-11 2ihf-a1-m1-cA_2ihf-a1-m2-cA
46 2ihf-a1-m2-cA 205 83 0.2526 0.1171 0.2892 2.14e-05 2ihf-a1-m1-cA_2ihf-a1-m2-cA
47 2ihf-a1-m1-cA 205 67 0.2947 0.1366 0.4179 7.95e-11 2ihf-a1-m1-cA_2ihf-a1-m2-cA
48 2ihf-a1-m1-cA 205 83 0.2526 0.1171 0.2892 2.14e-05 2ihf-a1-m1-cA_2ihf-a1-m2-cA
49 3udg-a2-m1-cC 214 81 0.2947 0.1308 0.3457 1.18e-10 3udg-a2-m1-cB_3udg-a2-m1-cC
50 3udg-a2-m1-cC 214 80 0.3053 0.1355 0.3625 1.66e-04 3udg-a2-m1-cB_3udg-a2-m1-cC
51 5odn-a1-m1-cH 99 73 0.2737 0.2626 0.3562 1.59e-10 5odn-a1-m1-cA_5odn-a1-m1-cH
52 5odn-a1-m1-cA 99 73 0.2737 0.2626 0.3562 1.59e-10 5odn-a1-m1-cA_5odn-a1-m1-cD, 5odn-a1-m1-cA_5odn-a1-m1-cH
53 4mz9-a1-m1-cD 114 84 0.2842 0.2368 0.3214 9.78e-10 4mz9-a1-m1-cB_4mz9-a1-m1-cD, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
54 4mz9-a1-m1-cC 114 84 0.2842 0.2368 0.3214 9.78e-10 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
55 4mz9-a1-m1-cB 114 84 0.2842 0.2368 0.3214 9.78e-10 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cB_4mz9-a1-m1-cD
56 3udg-a2-m1-cB 214 80 0.2737 0.1215 0.3250 1.24e-09 3udg-a2-m1-cB_3udg-a2-m1-cC
57 3udg-a2-m1-cB 214 78 0.3053 0.1355 0.3718 9.43e-05 3udg-a2-m1-cB_3udg-a2-m1-cC
58 3tqy-a1-m1-cC 106 84 0.3053 0.2736 0.3452 1.63e-09 3tqy-a1-m1-cD_3tqy-a1-m1-cC
59 5odn-a1-m1-cC 102 75 0.2842 0.2647 0.3600 1.96e-09 5odn-a1-m1-cC_5odn-a1-m1-cF
60 5odn-a1-m1-cD 106 74 0.2737 0.2453 0.3514 3.46e-09 5odn-a1-m1-cA_5odn-a1-m1-cD
61 5odn-a1-m1-cF 105 79 0.2737 0.2476 0.3291 1.02e-08 5odn-a1-m1-cC_5odn-a1-m1-cF
62 5gqo-a1-m2-cB 98 97 0.3474 0.3367 0.3402 3.96e-08 5gqo-a1-m1-cB_5gqo-a1-m2-cB
63 5gqo-a1-m1-cB 98 97 0.3474 0.3367 0.3402 3.96e-08 5gqo-a1-m1-cB_5gqo-a1-m2-cB
64 5odn-a1-m1-cE 105 83 0.2842 0.2571 0.3253 4.70e-08 5odn-a1-m1-cG_5odn-a1-m1-cE
65 5odn-a1-m1-cG 102 83 0.2842 0.2647 0.3253 5.85e-08 5odn-a1-m1-cG_5odn-a1-m1-cE
66 5odp-a1-m1-cA 99 93 0.3053 0.2929 0.3118 1.29e-07 5odp-a1-m1-cA_5odp-a1-m1-cG
67 1kaw-a1-m1-cD 96 74 0.2737 0.2708 0.3514 1.84e-07 1kaw-a1-m1-cC_1kaw-a1-m1-cD
68 1kaw-a1-m1-cC 96 74 0.2737 0.2708 0.3514 1.84e-07 1kaw-a1-m1-cA_1kaw-a1-m1-cC, 1kaw-a1-m1-cC_1kaw-a1-m1-cD
69 1kaw-a1-m1-cA 96 74 0.2737 0.2708 0.3514 1.84e-07 1kaw-a1-m1-cA_1kaw-a1-m1-cC
70 7f25-a1-m1-cB 106 79 0.2737 0.2453 0.3291 1.99e-07 7f25-a1-m1-cA_7f25-a1-m1-cB
71 7f25-a1-m1-cA 106 79 0.2737 0.2453 0.3291 1.99e-07 7f25-a1-m1-cA_7f25-a1-m1-cB
72 1se8-a1-m2-cA 205 79 0.2737 0.1268 0.3291 8.79e-07 1se8-a1-m1-cA_1se8-a1-m2-cA
73 1se8-a1-m2-cA 205 73 0.2947 0.1366 0.3836 0.006 1se8-a1-m1-cA_1se8-a1-m2-cA
74 1se8-a1-m1-cA 205 79 0.2737 0.1268 0.3291 8.79e-07 1se8-a1-m1-cA_1se8-a1-m2-cA
75 1se8-a1-m1-cA 205 73 0.2947 0.1366 0.3836 0.006 1se8-a1-m1-cA_1se8-a1-m2-cA
76 1sru-a1-m1-cC 96 74 0.2632 0.2604 0.3378 1.41e-06 1sru-a1-m1-cC_1sru-a1-m1-cA
77 2vw9-a1-m2-cB 105 79 0.2526 0.2286 0.3038 2.00e-06 2vw9-a1-m1-cB_2vw9-a1-m2-cB
78 2vw9-a1-m1-cB 105 79 0.2526 0.2286 0.3038 2.00e-06 2vw9-a1-m1-cB_2vw9-a1-m2-cB
79 5odp-a1-m1-cG 100 93 0.2947 0.2800 0.3011 2.73e-06 5odp-a1-m1-cA_5odp-a1-m1-cG
80 3pgz-a1-m1-cA 109 87 0.2421 0.2110 0.2644 1.73e-05 3pgz-a1-m1-cA_3pgz-a1-m1-cB
81 3lgj-a1-m1-cB 97 70 0.2000 0.1959 0.2714 1.29e-04 3lgj-a1-m1-cA_3lgj-a1-m1-cB
82 3pgz-a1-m1-cB 114 92 0.2421 0.2018 0.2500 1.62e-04 3pgz-a1-m1-cA_3pgz-a1-m1-cB
83 1z9f-a2-m4-cA 89 76 0.2737 0.2921 0.3421 2.13e-04 1z9f-a2-m1-cA_1z9f-a2-m4-cA, 1z9f-a2-m3-cA_1z9f-a2-m4-cA
84 1z9f-a2-m3-cA 89 76 0.2737 0.2921 0.3421 2.13e-04 1z9f-a2-m3-cA_1z9f-a2-m4-cA
85 1z9f-a2-m1-cA 89 76 0.2737 0.2921 0.3421 2.13e-04 1z9f-a2-m1-cA_1z9f-a2-m4-cA
86 3lgj-a1-m1-cA 95 69 0.2000 0.2000 0.2754 5.80e-04 3lgj-a1-m1-cA_3lgj-a1-m1-cB
87 4dam-a2-m1-cG 98 90 0.3158 0.3061 0.3333 0.026 4dam-a2-m1-cG_4dam-a2-m1-cH
88 4dam-a3-m1-cL 100 93 0.3158 0.3000 0.3226 0.069 4dam-a3-m1-cL_4dam-a3-m1-cI
89 4h0u-a2-m1-cD 254 41 0.1474 0.0551 0.3415 0.091 4h0u-a2-m1-cC_4h0u-a2-m1-cD
90 4h0u-a2-m1-cC 254 41 0.1474 0.0551 0.3415 0.096 4h0u-a2-m1-cC_4h0u-a2-m1-cD
91 4dam-a2-m1-cH 108 83 0.3158 0.2778 0.3614 0.11 4dam-a2-m1-cG_4dam-a2-m1-cH
92 3ulp-a1-m1-cA 114 61 0.1579 0.1316 0.2459 0.11 3ulp-a1-m1-cD_3ulp-a1-m1-cA
93 3ulp-a1-m1-cC 116 61 0.1579 0.1293 0.2459 0.11 3ulp-a1-m1-cD_3ulp-a1-m1-cC
94 4dam-a3-m1-cI 110 85 0.2947 0.2545 0.3294 0.25 4dam-a3-m1-cL_4dam-a3-m1-cI
95 4dam-a2-m1-cF 110 85 0.2947 0.2545 0.3294 0.25 4dam-a2-m1-cF_4dam-a2-m1-cE
96 4dam-a2-m1-cE 112 85 0.2947 0.2500 0.3294 0.27 4dam-a2-m1-cF_4dam-a2-m1-cE
97 3ulp-a1-m1-cD 113 79 0.2000 0.1681 0.2405 1.1 3ulp-a1-m1-cD_3ulp-a1-m1-cA, 3ulp-a1-m1-cD_3ulp-a1-m1-cB, 3ulp-a1-m1-cD_3ulp-a1-m1-cC
98 3ulp-a1-m1-cB 114 61 0.1579 0.1316 0.2459 2.0 3ulp-a1-m1-cD_3ulp-a1-m1-cB
99 3jz4-a1-m1-cD 481 23 0.0947 0.0187 0.3913 2.6 3jz4-a1-m1-cA_3jz4-a1-m1-cD, 3jz4-a1-m1-cB_3jz4-a1-m1-cD, 3jz4-a1-m1-cC_3jz4-a1-m1-cD
100 3jz4-a1-m1-cC 481 23 0.0947 0.0187 0.3913 2.6 3jz4-a1-m1-cC_3jz4-a1-m1-cD
101 3jz4-a1-m1-cB 481 23 0.0947 0.0187 0.3913 2.6 3jz4-a1-m1-cB_3jz4-a1-m1-cD
102 3jz4-a1-m1-cA 481 23 0.0947 0.0187 0.3913 2.6 3jz4-a1-m1-cA_3jz4-a1-m1-cD
103 4m8s-a1-m1-cB 246 68 0.2105 0.0813 0.2941 4.5 4m8s-a1-m1-cD_4m8s-a1-m1-cB
104 4m8s-a1-m1-cC 247 68 0.2105 0.0810 0.2941 4.7 4m8s-a1-m1-cD_4m8s-a1-m1-cC
105 4m8s-a1-m1-cD 237 66 0.2000 0.0802 0.2879 4.8 4m8s-a1-m1-cD_4m8s-a1-m1-cB, 4m8s-a1-m1-cD_4m8s-a1-m1-cC
106 6c9e-a1-m1-cA 404 39 0.1579 0.0371 0.3846 9.7 6c9e-a1-m1-cA_6c9e-a1-m1-cB
107 6c9e-a1-m1-cB 405 39 0.1579 0.0370 0.3846 9.9 6c9e-a1-m1-cA_6c9e-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600