Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=59)
GEDVFEVEKILDMKTEGGKVLYKVRWKGYTSDDDTWEPEIHLEDCKEVLLEFRKKIAEN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lwe-a4-m1-cA 61 59 1.0000 0.9672 1.0000 5.61e-38 3lwe-a4-m1-cB_3lwe-a4-m1-cA
2 3lwe-a3-m1-cA 61 59 1.0000 0.9672 1.0000 5.61e-38 3lwe-a3-m2-cB_3lwe-a3-m1-cA
3 3lwe-a4-m1-cB 59 59 1.0000 1.0000 1.0000 7.91e-38 3lwe-a4-m1-cB_3lwe-a4-m1-cA
4 3lwe-a3-m2-cB 59 59 1.0000 1.0000 1.0000 7.91e-38 3lwe-a3-m2-cB_3lwe-a3-m1-cA
5 7slw-a2-m1-cE 56 51 0.4746 0.5000 0.5490 1.67e-12 7slw-a2-m1-cE_7slw-a2-m1-cF
6 7slw-a2-m1-cF 57 51 0.4746 0.4912 0.5490 1.71e-12 7slw-a2-m1-cE_7slw-a2-m1-cF
7 5jjz-a2-m2-cA 59 48 0.4407 0.4407 0.5417 1.52e-11 5jjz-a2-m1-cA_5jjz-a2-m2-cA
8 5jjz-a2-m1-cA 59 48 0.4407 0.4407 0.5417 1.52e-11 5jjz-a2-m1-cA_5jjz-a2-m2-cA
9 3dm1-a5-m1-cC 52 48 0.4237 0.4808 0.5208 7.01e-11 3dm1-a5-m1-cC_3dm1-a5-m1-cE, 3dm1-a5-m1-cC_3dm1-a5-m1-cG
10 3dm1-a5-m1-cA 52 48 0.4237 0.4808 0.5208 7.01e-11 3dm1-a5-m1-cA_3dm1-a5-m1-cG
11 3dm1-a5-m1-cG 53 48 0.4237 0.4717 0.5208 7.32e-11 3dm1-a5-m1-cA_3dm1-a5-m1-cG, 3dm1-a5-m1-cC_3dm1-a5-m1-cG, 3dm1-a5-m1-cE_3dm1-a5-m1-cG
12 3dm1-a5-m1-cE 53 48 0.4237 0.4717 0.5208 7.32e-11 3dm1-a5-m1-cC_3dm1-a5-m1-cE, 3dm1-a5-m1-cE_3dm1-a5-m1-cG
13 3f2u-a1-m2-cA 51 48 0.3898 0.4510 0.4792 2.39e-10 3f2u-a1-m1-cA_3f2u-a1-m2-cA
14 3f2u-a1-m1-cA 51 48 0.3898 0.4510 0.4792 2.39e-10 3f2u-a1-m1-cA_3f2u-a1-m2-cA
15 4x3t-a3-m1-cE 51 49 0.3898 0.4510 0.4694 2.10e-09 4x3t-a3-m1-cE_4x3t-a3-m1-cD
16 4x3t-a2-m1-cF 56 49 0.3898 0.4107 0.4694 2.42e-09 4x3t-a2-m1-cF_4x3t-a2-m1-cC
17 4x3t-a3-m1-cD 62 49 0.3898 0.3710 0.4694 2.95e-09 4x3t-a3-m1-cE_4x3t-a3-m1-cD
18 4x3t-a2-m1-cC 62 49 0.3898 0.3710 0.4694 2.95e-09 4x3t-a2-m1-cF_4x3t-a2-m1-cC
19 5ejw-a2-m2-cA 80 49 0.3898 0.2875 0.4694 4.43e-09 5ejw-a2-m1-cA_5ejw-a2-m2-cA
20 5ejw-a2-m1-cA 80 49 0.3898 0.2875 0.4694 4.43e-09 5ejw-a2-m1-cA_5ejw-a2-m2-cA
21 3h91-a3-m2-cB 52 53 0.3729 0.4231 0.4151 1.72e-08 3h91-a3-m1-cB_3h91-a3-m2-cB
22 3h91-a3-m1-cB 52 53 0.3729 0.4231 0.4151 1.72e-08 3h91-a3-m1-cB_3h91-a3-m2-cB
23 1pfb-a2-m2-cA 55 43 0.2881 0.3091 0.3953 2.25e-07 1pfb-a2-m1-cA_1pfb-a2-m2-cA
24 1pfb-a2-m1-cA 55 43 0.2881 0.3091 0.3953 2.25e-07 1pfb-a2-m1-cA_1pfb-a2-m2-cA
25 4ft2-a1-m1-cB 670 52 0.3390 0.0299 0.3846 1.90e-06 4ft2-a1-m1-cB_4ft2-a1-m1-cA
26 4ft2-a1-m1-cA 674 33 0.2542 0.0223 0.4545 4.08e-06 4ft2-a1-m1-cB_4ft2-a1-m1-cA
27 4quf-a2-m1-cD 58 52 0.2542 0.2586 0.2885 9.99e-06 4quf-a2-m1-cD_4quf-a2-m1-cC
28 4quf-a2-m1-cC 61 52 0.2542 0.2459 0.2885 1.11e-05 4quf-a2-m1-cD_4quf-a2-m1-cC
29 7vrf-a1-m1-cB 60 53 0.2542 0.2500 0.2830 8.63e-04 7vrf-a1-m1-cB_7vrf-a1-m1-cA
30 7vrf-a1-m1-cA 61 53 0.2542 0.2459 0.2830 0.001 7vrf-a1-m1-cB_7vrf-a1-m1-cA
31 2b2w-a1-m1-cB 175 26 0.1864 0.0629 0.4231 0.27 2b2w-a1-m1-cB_2b2w-a1-m1-cA
32 2b2w-a1-m1-cC 86 24 0.1695 0.1163 0.4167 0.38 2b2w-a1-m1-cC_2b2w-a1-m1-cA
33 2b2w-a1-m1-cA 177 24 0.1695 0.0565 0.4167 0.66 2b2w-a1-m1-cB_2b2w-a1-m1-cA, 2b2w-a1-m1-cC_2b2w-a1-m1-cA
34 6ie0-a2-m1-cD 347 29 0.2203 0.0375 0.4483 2.1 6ie0-a2-m1-cB_6ie0-a2-m1-cD
35 6ie0-a2-m1-cB 347 29 0.2203 0.0375 0.4483 2.1 6ie0-a2-m1-cB_6ie0-a2-m1-cD
36 6giw-a1-m1-cB 155 53 0.2881 0.1097 0.3208 5.9 6giw-a1-m1-cB_6giw-a1-m1-cC
37 6uag-a1-m1-cB 91 23 0.1695 0.1099 0.4348 6.5 6uag-a1-m1-cB_6uag-a1-m1-cA
38 4lw2-a2-m1-cC 398 23 0.1356 0.0201 0.3478 6.9 4lw2-a2-m1-cC_4lw2-a2-m1-cB
39 4lw2-a2-m1-cB 399 23 0.1356 0.0201 0.3478 6.9 4lw2-a2-m1-cC_4lw2-a2-m1-cB
40 6uag-a1-m1-cA 94 23 0.1695 0.1064 0.4348 6.9 6uag-a1-m1-cB_6uag-a1-m1-cA
41 2fmm-a1-m2-cC 67 48 0.1864 0.1642 0.2292 10.0 2fmm-a1-m2-cC_2fmm-a1-m2-cA, 2fmm-a1-m2-cD_2fmm-a1-m2-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600