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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTE
KENATVAHLVGALRSCQMNLVADLVQEVQQAR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3oq9-a1-m1-cI 92 92 1.0000 1.0000 1.0000 4.50e-64 3oq9-a1-m1-cH_3oq9-a1-m1-cI
2 3oq9-a1-m1-cH 92 92 1.0000 1.0000 1.0000 4.50e-64 3oq9-a1-m1-cH_3oq9-a1-m1-cI
3 2yvi-a2-m2-cA 89 76 0.2717 0.2809 0.3289 4.01e-06 2yvi-a2-m1-cA_2yvi-a2-m2-cA
4 2yvi-a2-m1-cA 89 76 0.2717 0.2809 0.3289 4.01e-06 2yvi-a2-m1-cA_2yvi-a2-m2-cA
5 4o6x-a3-m2-cB 95 63 0.2065 0.2000 0.3016 0.001 4o6x-a3-m2-cB_4o6x-a3-m1-cA
6 4o6x-a3-m1-cA 98 63 0.2065 0.1939 0.3016 0.001 4o6x-a3-m2-cB_4o6x-a3-m1-cA
7 2of5-a1-m1-cF 91 70 0.1848 0.1868 0.2429 0.004 2of5-a1-m1-cE_2of5-a1-m1-cF
8 2of5-a1-m1-cE 91 70 0.1848 0.1868 0.2429 0.004 2of5-a1-m1-cA_2of5-a1-m1-cE, 2of5-a1-m1-cD_2of5-a1-m1-cE, 2of5-a1-m1-cE_2of5-a1-m1-cF
9 2of5-a1-m1-cD 91 70 0.1848 0.1868 0.2429 0.004 2of5-a1-m1-cD_2of5-a1-m1-cE
10 2of5-a1-m1-cA 91 70 0.1848 0.1868 0.2429 0.004 2of5-a1-m1-cA_2of5-a1-m1-cE
11 1vkh-a2-m1-cA 253 69 0.2717 0.0988 0.3623 0.38 1vkh-a2-m2-cB_1vkh-a2-m1-cA
12 1vkh-a1-m1-cA 253 69 0.2717 0.0988 0.3623 0.38 1vkh-a1-m1-cB_1vkh-a1-m1-cA
13 1vkh-a2-m2-cB 245 69 0.2717 0.1020 0.3623 0.38 1vkh-a2-m2-cB_1vkh-a2-m1-cA
14 1vkh-a1-m1-cB 245 69 0.2717 0.1020 0.3623 0.38 1vkh-a1-m1-cB_1vkh-a1-m1-cA
15 2aax-a1-m1-cA 261 27 0.0978 0.0345 0.3333 3.3 2aax-a1-m1-cB_2aax-a1-m1-cA
16 4r2k-a1-m2-cA 311 48 0.1848 0.0547 0.3542 6.2 4r2k-a1-m1-cA_4r2k-a1-m2-cA
17 4r2k-a1-m1-cA 311 48 0.1848 0.0547 0.3542 6.2 4r2k-a1-m1-cA_4r2k-a1-m2-cA
18 2ms7-a1-m1-cU 102 43 0.1304 0.1176 0.2791 9.6 2ms7-a1-m1-cQ_2ms7-a1-m1-cU, 2ms7-a1-m1-cT_2ms7-a1-m1-cU
19 2ms7-a1-m1-cT 102 43 0.1304 0.1176 0.2791 9.6 2ms7-a1-m1-cT_2ms7-a1-m1-cU
20 2ms7-a1-m1-cQ 102 43 0.1304 0.1176 0.2791 9.6 2ms7-a1-m1-cQ_2ms7-a1-m1-cU
21 7ahl-a1-m1-cG 293 19 0.0978 0.0307 0.4737 9.9 7ahl-a1-m1-cF_7ahl-a1-m1-cG
22 7ahl-a1-m1-cF 293 19 0.0978 0.0307 0.4737 9.9 7ahl-a1-m1-cF_7ahl-a1-m1-cG

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Reference:
Jacob Schwartz et al.

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