Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=29)
GEFAQALKEFAKALKEFAWALKEFAQALK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6g6f-a1-m1-cH 29 29 1.0000 1.0000 1.0000 3.05e-12 6g6f-a1-m1-cH_6g6f-a1-m1-cA
2 6g6f-a1-m1-cG 30 29 1.0000 0.9667 1.0000 3.29e-12 6g6f-a1-m1-cA_6g6f-a1-m1-cG
3 6g6f-a1-m1-cC 30 29 1.0000 0.9667 1.0000 3.29e-12 6g6f-a1-m1-cB_6g6f-a1-m1-cC
4 6g6f-a1-m1-cB 30 29 1.0000 0.9667 1.0000 3.29e-12 6g6f-a1-m1-cB_6g6f-a1-m1-cC
5 6g6f-a1-m1-cA 30 29 1.0000 0.9667 1.0000 3.29e-12 6g6f-a1-m1-cA_6g6f-a1-m1-cG, 6g6f-a1-m1-cH_6g6f-a1-m1-cA
6 7nfh-a1-m1-cG 30 29 0.7241 0.7000 0.7241 1.62e-09 7nfh-a1-m1-cC_7nfh-a1-m1-cG, 7nfh-a1-m1-cE_7nfh-a1-m1-cG
7 7nfh-a1-m1-cF 30 29 0.7241 0.7000 0.7241 1.62e-09 7nfh-a1-m1-cD_7nfh-a1-m1-cF
8 7nfh-a1-m1-cE 30 29 0.7241 0.7000 0.7241 1.62e-09 7nfh-a1-m1-cA_7nfh-a1-m1-cE, 7nfh-a1-m1-cE_7nfh-a1-m1-cG
9 7nfh-a1-m1-cD 30 29 0.7241 0.7000 0.7241 1.62e-09 7nfh-a1-m1-cB_7nfh-a1-m1-cD, 7nfh-a1-m1-cD_7nfh-a1-m1-cF
10 7nfh-a1-m1-cC 30 29 0.7241 0.7000 0.7241 1.62e-09 7nfh-a1-m1-cC_7nfh-a1-m1-cG
11 7nfh-a1-m1-cB 30 29 0.7241 0.7000 0.7241 1.62e-09 7nfh-a1-m1-cB_7nfh-a1-m1-cD
12 7nfh-a1-m1-cA 30 29 0.7241 0.7000 0.7241 1.62e-09 7nfh-a1-m1-cA_7nfh-a1-m1-cE
13 6g67-a1-m4-cB 30 29 0.7241 0.7000 0.7241 1.77e-09 6g67-a1-m2-cA_6g67-a1-m4-cB, 6g67-a1-m4-cA_6g67-a1-m4-cB
14 6g67-a1-m4-cA 30 29 0.7241 0.7000 0.7241 1.77e-09 6g67-a1-m1-cB_6g67-a1-m4-cA, 6g67-a1-m4-cA_6g67-a1-m4-cB
15 6g67-a1-m3-cB 30 29 0.7241 0.7000 0.7241 1.77e-09 6g67-a1-m1-cA_6g67-a1-m3-cB, 6g67-a1-m3-cA_6g67-a1-m3-cB
16 6g67-a1-m3-cA 30 29 0.7241 0.7000 0.7241 1.77e-09 6g67-a1-m2-cB_6g67-a1-m3-cA, 6g67-a1-m3-cA_6g67-a1-m3-cB
17 6g67-a1-m2-cB 30 29 0.7241 0.7000 0.7241 1.77e-09 6g67-a1-m2-cB_6g67-a1-m3-cA
18 6g67-a1-m2-cA 30 29 0.7241 0.7000 0.7241 1.77e-09 6g67-a1-m2-cA_6g67-a1-m4-cB
19 6g67-a1-m1-cB 30 29 0.7241 0.7000 0.7241 1.77e-09 6g67-a1-m1-cB_6g67-a1-m4-cA
20 6g67-a1-m1-cA 30 29 0.7241 0.7000 0.7241 1.77e-09 6g67-a1-m1-cA_6g67-a1-m3-cB
21 6g66-a1-m1-cG 30 29 0.7241 0.7000 0.7241 3.69e-09 6g66-a1-m1-cA_6g66-a1-m1-cG, 6g66-a1-m1-cF_6g66-a1-m1-cG
22 6g66-a1-m1-cF 30 29 0.7241 0.7000 0.7241 3.69e-09 6g66-a1-m1-cE_6g66-a1-m1-cF, 6g66-a1-m1-cF_6g66-a1-m1-cG
23 6g66-a1-m1-cE 30 29 0.7241 0.7000 0.7241 3.69e-09 6g66-a1-m1-cD_6g66-a1-m1-cE, 6g66-a1-m1-cE_6g66-a1-m1-cF
24 6g66-a1-m1-cD 30 29 0.7241 0.7000 0.7241 3.69e-09 6g66-a1-m1-cC_6g66-a1-m1-cD, 6g66-a1-m1-cD_6g66-a1-m1-cE
25 6g66-a1-m1-cC 30 29 0.7241 0.7000 0.7241 3.69e-09 6g66-a1-m1-cB_6g66-a1-m1-cC, 6g66-a1-m1-cC_6g66-a1-m1-cD
26 6g66-a1-m1-cB 30 29 0.7241 0.7000 0.7241 3.69e-09 6g66-a1-m1-cB_6g66-a1-m1-cC
27 6g66-a1-m1-cA 30 29 0.7241 0.7000 0.7241 3.69e-09 6g66-a1-m1-cA_6g66-a1-m1-cG
28 6g6d-a1-m2-cC 30 29 0.7241 0.7000 0.7241 4.02e-09 6g6d-a1-m1-cA_6g6d-a1-m2-cC, 6g6d-a1-m2-cB_6g6d-a1-m2-cC
29 6g6d-a1-m2-cB 30 29 0.7241 0.7000 0.7241 4.02e-09 6g6d-a1-m2-cA_6g6d-a1-m2-cB, 6g6d-a1-m2-cB_6g6d-a1-m2-cC
30 6g6d-a1-m2-cA 30 29 0.7241 0.7000 0.7241 4.02e-09 6g6d-a1-m1-cC_6g6d-a1-m2-cA, 6g6d-a1-m2-cA_6g6d-a1-m2-cB
31 6g6d-a1-m1-cC 30 29 0.7241 0.7000 0.7241 4.02e-09 6g6d-a1-m1-cB_6g6d-a1-m1-cC, 6g6d-a1-m1-cC_6g6d-a1-m2-cA
32 6g6d-a1-m1-cB 30 29 0.7241 0.7000 0.7241 4.02e-09 6g6d-a1-m1-cA_6g6d-a1-m1-cB, 6g6d-a1-m1-cB_6g6d-a1-m1-cC
33 6g6d-a1-m1-cA 30 29 0.7241 0.7000 0.7241 4.02e-09 6g6d-a1-m1-cA_6g6d-a1-m1-cB, 6g6d-a1-m1-cA_6g6d-a1-m2-cC
34 6g65-a4-m3-cL 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a4-m1-cJ_6g65-a4-m3-cL, 6g65-a4-m3-cK_6g65-a4-m3-cL
35 6g65-a4-m3-cK 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a4-m3-cJ_6g65-a4-m3-cK, 6g65-a4-m3-cK_6g65-a4-m3-cL
36 6g65-a4-m3-cJ 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a4-m1-cL_6g65-a4-m3-cJ, 6g65-a4-m3-cJ_6g65-a4-m3-cK
37 6g65-a4-m1-cL 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a4-m1-cK_6g65-a4-m1-cL, 6g65-a4-m1-cL_6g65-a4-m3-cJ
38 6g65-a4-m1-cK 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a4-m1-cK_6g65-a4-m1-cL
39 6g65-a4-m1-cJ 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a4-m1-cJ_6g65-a4-m3-cL
40 6g65-a3-m3-cI 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a3-m1-cG_6g65-a3-m3-cI, 6g65-a3-m3-cH_6g65-a3-m3-cI
41 6g65-a3-m3-cH 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a3-m3-cG_6g65-a3-m3-cH, 6g65-a3-m3-cH_6g65-a3-m3-cI
42 6g65-a3-m3-cG 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a3-m1-cI_6g65-a3-m3-cG, 6g65-a3-m3-cG_6g65-a3-m3-cH
43 6g65-a3-m1-cI 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a3-m1-cH_6g65-a3-m1-cI, 6g65-a3-m1-cI_6g65-a3-m3-cG
44 6g65-a3-m1-cH 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a3-m1-cH_6g65-a3-m1-cI
45 6g65-a3-m1-cG 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a3-m1-cG_6g65-a3-m3-cI
46 6g65-a2-m2-cF 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a2-m1-cD_6g65-a2-m2-cF, 6g65-a2-m2-cE_6g65-a2-m2-cF
47 6g65-a2-m2-cE 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a2-m2-cD_6g65-a2-m2-cE, 6g65-a2-m2-cE_6g65-a2-m2-cF
48 6g65-a2-m2-cD 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a2-m1-cF_6g65-a2-m2-cD, 6g65-a2-m2-cD_6g65-a2-m2-cE
49 6g65-a2-m1-cF 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a2-m1-cE_6g65-a2-m1-cF, 6g65-a2-m1-cF_6g65-a2-m2-cD
50 6g65-a2-m1-cE 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a2-m1-cE_6g65-a2-m1-cF
51 6g65-a2-m1-cD 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a2-m1-cD_6g65-a2-m2-cF
52 6g65-a1-m2-cC 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a1-m1-cA_6g65-a1-m2-cC, 6g65-a1-m2-cB_6g65-a1-m2-cC
53 6g65-a1-m2-cB 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a1-m2-cA_6g65-a1-m2-cB, 6g65-a1-m2-cB_6g65-a1-m2-cC
54 6g65-a1-m2-cA 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a1-m1-cC_6g65-a1-m2-cA, 6g65-a1-m2-cA_6g65-a1-m2-cB
55 6g65-a1-m1-cC 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a1-m1-cB_6g65-a1-m1-cC, 6g65-a1-m1-cC_6g65-a1-m2-cA
56 6g65-a1-m1-cB 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a1-m1-cB_6g65-a1-m1-cC
57 6g65-a1-m1-cA 30 29 0.7241 0.7000 0.7241 8.13e-09 6g65-a1-m1-cA_6g65-a1-m2-cC
58 8a09-a1-m3-cB 29 29 0.7241 0.7241 0.7241 1.18e-07 8a09-a1-m3-cA_8a09-a1-m3-cB
59 8a09-a1-m3-cA 29 29 0.7241 0.7241 0.7241 1.18e-07 8a09-a1-m3-cA_8a09-a1-m3-cB
60 7boa-a1-m1-cD 29 29 0.8276 0.8276 0.8276 9.13e-07 7boa-a1-m1-cA_7boa-a1-m1-cD
61 7boa-a1-m1-cA 29 29 0.8276 0.8276 0.8276 9.13e-07 7boa-a1-m1-cA_7boa-a1-m1-cD
62 7a1t-a1-m1-cF 29 29 0.6897 0.6897 0.6897 9.46e-06 7a1t-a1-m1-cA_7a1t-a1-m1-cF
63 7a1t-a1-m1-cB 29 29 0.6897 0.6897 0.6897 9.46e-06 7a1t-a1-m1-cA_7a1t-a1-m1-cB
64 7a1t-a1-m1-cA 29 29 0.6897 0.6897 0.6897 9.46e-06 7a1t-a1-m1-cA_7a1t-a1-m1-cB, 7a1t-a1-m1-cA_7a1t-a1-m1-cF
65 7bas-a1-m1-cE 29 29 0.6897 0.6897 0.6897 9.57e-06 7bas-a1-m1-cA_7bas-a1-m1-cE
66 7bas-a1-m1-cA 29 29 0.6897 0.6897 0.6897 9.57e-06 7bas-a1-m1-cA_7bas-a1-m1-cE
67 7bau-a2-m1-cH 28 29 0.5517 0.5714 0.5517 6.11e-05 7bau-a2-m1-cH_7bau-a2-m1-cI
68 7bau-a2-m1-cI 29 29 0.5517 0.5517 0.5517 6.12e-05 7bau-a2-m1-cH_7bau-a2-m1-cI
69 7nfp-a1-m1-cG 29 29 0.6207 0.6207 0.6207 3.82e-04 7nfp-a1-m1-cF_7nfp-a1-m1-cG
70 7nfp-a1-m1-cF 29 29 0.6207 0.6207 0.6207 3.82e-04 7nfp-a1-m1-cF_7nfp-a1-m1-cG
71 6xy1-a1-m1-cD 30 29 0.5172 0.5000 0.5172 4.88e-04 6xy1-a1-m1-cB_6xy1-a1-m1-cD
72 6xy1-a1-m1-cB 30 29 0.5172 0.5000 0.5172 4.88e-04 6xy1-a1-m1-cB_6xy1-a1-m1-cD
73 7t1c-a1-m4-cA 453 18 0.3448 0.0221 0.5556 0.44 7t1c-a1-m1-cA_7t1c-a1-m4-cA, 7t1c-a1-m2-cA_7t1c-a1-m4-cA
74 7t1c-a1-m2-cA 453 18 0.3448 0.0221 0.5556 0.44 7t1c-a1-m2-cA_7t1c-a1-m4-cA
75 7t1c-a1-m1-cA 453 18 0.3448 0.0221 0.5556 0.44 7t1c-a1-m1-cA_7t1c-a1-m4-cA
76 6xxz-a1-m2-cB 30 28 0.4138 0.4000 0.4286 1.1 6xxz-a1-m2-cA_6xxz-a1-m2-cB
77 6xxz-a1-m2-cA 30 28 0.4138 0.4000 0.4286 1.1 6xxz-a1-m2-cA_6xxz-a1-m2-cB
78 4ezc-a1-m1-cC 346 27 0.3448 0.0289 0.3704 5.4 4ezc-a1-m1-cB_4ezc-a1-m1-cC
79 4ezc-a1-m1-cB 346 27 0.3448 0.0289 0.3704 5.4 4ezc-a1-m1-cB_4ezc-a1-m1-cC
80 3ug3-a1-m1-cF 482 24 0.3448 0.0207 0.4167 7.2 3ug3-a1-m1-cE_3ug3-a1-m1-cF
81 3ug3-a1-m1-cE 482 24 0.3448 0.0207 0.4167 7.2 3ug3-a1-m1-cB_3ug3-a1-m1-cE, 3ug3-a1-m1-cE_3ug3-a1-m1-cF
82 3ug3-a1-m1-cB 482 24 0.3448 0.0207 0.4167 7.2 3ug3-a1-m1-cB_3ug3-a1-m1-cE

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600