Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=29)
GEFAQAYKEFAKAYKEFAAYKEFAQAYKG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7boa-a1-m1-cD 29 29 1.0000 1.0000 1.0000 4.28e-12 7boa-a1-m1-cA_7boa-a1-m1-cD
2 7boa-a1-m1-cA 29 29 1.0000 1.0000 1.0000 4.28e-12 7boa-a1-m1-cA_7boa-a1-m1-cD
3 6g6f-a1-m1-cG 30 30 0.8621 0.8333 0.8333 1.17e-07 6g6f-a1-m1-cA_6g6f-a1-m1-cG
4 6g6f-a1-m1-cC 30 30 0.8621 0.8333 0.8333 1.17e-07 6g6f-a1-m1-cB_6g6f-a1-m1-cC
5 6g6f-a1-m1-cB 30 30 0.8621 0.8333 0.8333 1.17e-07 6g6f-a1-m1-cB_6g6f-a1-m1-cC
6 6g6f-a1-m1-cA 30 30 0.8621 0.8333 0.8333 1.17e-07 6g6f-a1-m1-cA_6g6f-a1-m1-cG, 6g6f-a1-m1-cH_6g6f-a1-m1-cA
7 6g6f-a1-m1-cH 29 29 0.8276 0.8276 0.8276 9.13e-07 6g6f-a1-m1-cH_6g6f-a1-m1-cA
8 6g67-a1-m4-cB 30 30 0.7241 0.7000 0.7000 2.02e-06 6g67-a1-m2-cA_6g67-a1-m4-cB, 6g67-a1-m4-cA_6g67-a1-m4-cB
9 6g67-a1-m4-cA 30 30 0.7241 0.7000 0.7000 2.02e-06 6g67-a1-m1-cB_6g67-a1-m4-cA, 6g67-a1-m4-cA_6g67-a1-m4-cB
10 6g67-a1-m3-cB 30 30 0.7241 0.7000 0.7000 2.02e-06 6g67-a1-m1-cA_6g67-a1-m3-cB, 6g67-a1-m3-cA_6g67-a1-m3-cB
11 6g67-a1-m3-cA 30 30 0.7241 0.7000 0.7000 2.02e-06 6g67-a1-m2-cB_6g67-a1-m3-cA, 6g67-a1-m3-cA_6g67-a1-m3-cB
12 6g67-a1-m2-cB 30 30 0.7241 0.7000 0.7000 2.02e-06 6g67-a1-m2-cB_6g67-a1-m3-cA
13 6g67-a1-m2-cA 30 30 0.7241 0.7000 0.7000 2.02e-06 6g67-a1-m2-cA_6g67-a1-m4-cB
14 6g67-a1-m1-cB 30 30 0.7241 0.7000 0.7000 2.02e-06 6g67-a1-m1-cB_6g67-a1-m4-cA
15 6g67-a1-m1-cA 30 30 0.7241 0.7000 0.7000 2.02e-06 6g67-a1-m1-cA_6g67-a1-m3-cB
16 7nfh-a1-m1-cG 30 30 0.7241 0.7000 0.7000 2.25e-06 7nfh-a1-m1-cC_7nfh-a1-m1-cG, 7nfh-a1-m1-cE_7nfh-a1-m1-cG
17 7nfh-a1-m1-cF 30 30 0.7241 0.7000 0.7000 2.25e-06 7nfh-a1-m1-cD_7nfh-a1-m1-cF
18 7nfh-a1-m1-cE 30 30 0.7241 0.7000 0.7000 2.25e-06 7nfh-a1-m1-cA_7nfh-a1-m1-cE, 7nfh-a1-m1-cE_7nfh-a1-m1-cG
19 7nfh-a1-m1-cD 30 30 0.7241 0.7000 0.7000 2.25e-06 7nfh-a1-m1-cB_7nfh-a1-m1-cD, 7nfh-a1-m1-cD_7nfh-a1-m1-cF
20 7nfh-a1-m1-cC 30 30 0.7241 0.7000 0.7000 2.25e-06 7nfh-a1-m1-cC_7nfh-a1-m1-cG
21 7nfh-a1-m1-cB 30 30 0.7241 0.7000 0.7000 2.25e-06 7nfh-a1-m1-cB_7nfh-a1-m1-cD
22 7nfh-a1-m1-cA 30 30 0.7241 0.7000 0.7000 2.25e-06 7nfh-a1-m1-cA_7nfh-a1-m1-cE
23 6g65-a4-m3-cL 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a4-m1-cJ_6g65-a4-m3-cL, 6g65-a4-m3-cK_6g65-a4-m3-cL
24 6g65-a4-m3-cK 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a4-m3-cJ_6g65-a4-m3-cK, 6g65-a4-m3-cK_6g65-a4-m3-cL
25 6g65-a4-m3-cJ 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a4-m1-cL_6g65-a4-m3-cJ, 6g65-a4-m3-cJ_6g65-a4-m3-cK
26 6g65-a4-m1-cL 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a4-m1-cK_6g65-a4-m1-cL, 6g65-a4-m1-cL_6g65-a4-m3-cJ
27 6g65-a4-m1-cK 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a4-m1-cK_6g65-a4-m1-cL
28 6g65-a4-m1-cJ 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a4-m1-cJ_6g65-a4-m3-cL
29 6g65-a3-m3-cI 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a3-m1-cG_6g65-a3-m3-cI, 6g65-a3-m3-cH_6g65-a3-m3-cI
30 6g65-a3-m3-cH 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a3-m3-cG_6g65-a3-m3-cH, 6g65-a3-m3-cH_6g65-a3-m3-cI
31 6g65-a3-m3-cG 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a3-m1-cI_6g65-a3-m3-cG, 6g65-a3-m3-cG_6g65-a3-m3-cH
32 6g65-a3-m1-cI 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a3-m1-cH_6g65-a3-m1-cI, 6g65-a3-m1-cI_6g65-a3-m3-cG
33 6g65-a3-m1-cH 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a3-m1-cH_6g65-a3-m1-cI
34 6g65-a3-m1-cG 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a3-m1-cG_6g65-a3-m3-cI
35 6g65-a2-m2-cF 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a2-m1-cD_6g65-a2-m2-cF, 6g65-a2-m2-cE_6g65-a2-m2-cF
36 6g65-a2-m2-cE 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a2-m2-cD_6g65-a2-m2-cE, 6g65-a2-m2-cE_6g65-a2-m2-cF
37 6g65-a2-m2-cD 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a2-m1-cF_6g65-a2-m2-cD, 6g65-a2-m2-cD_6g65-a2-m2-cE
38 6g65-a2-m1-cF 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a2-m1-cE_6g65-a2-m1-cF, 6g65-a2-m1-cF_6g65-a2-m2-cD
39 6g65-a2-m1-cE 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a2-m1-cE_6g65-a2-m1-cF
40 6g65-a2-m1-cD 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a2-m1-cD_6g65-a2-m2-cF
41 6g65-a1-m2-cC 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a1-m1-cA_6g65-a1-m2-cC, 6g65-a1-m2-cB_6g65-a1-m2-cC
42 6g65-a1-m2-cB 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a1-m2-cA_6g65-a1-m2-cB, 6g65-a1-m2-cB_6g65-a1-m2-cC
43 6g65-a1-m2-cA 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a1-m1-cC_6g65-a1-m2-cA, 6g65-a1-m2-cA_6g65-a1-m2-cB
44 6g65-a1-m1-cC 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a1-m1-cB_6g65-a1-m1-cC, 6g65-a1-m1-cC_6g65-a1-m2-cA
45 6g65-a1-m1-cB 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a1-m1-cB_6g65-a1-m1-cC
46 6g65-a1-m1-cA 30 30 0.7241 0.7000 0.7000 5.60e-06 6g65-a1-m1-cA_6g65-a1-m2-cC
47 6g66-a1-m1-cG 30 30 0.7241 0.7000 0.7000 7.36e-06 6g66-a1-m1-cA_6g66-a1-m1-cG, 6g66-a1-m1-cF_6g66-a1-m1-cG
48 6g66-a1-m1-cF 30 30 0.7241 0.7000 0.7000 7.36e-06 6g66-a1-m1-cE_6g66-a1-m1-cF, 6g66-a1-m1-cF_6g66-a1-m1-cG
49 6g66-a1-m1-cE 30 30 0.7241 0.7000 0.7000 7.36e-06 6g66-a1-m1-cD_6g66-a1-m1-cE, 6g66-a1-m1-cE_6g66-a1-m1-cF
50 6g66-a1-m1-cD 30 30 0.7241 0.7000 0.7000 7.36e-06 6g66-a1-m1-cC_6g66-a1-m1-cD, 6g66-a1-m1-cD_6g66-a1-m1-cE
51 6g66-a1-m1-cC 30 30 0.7241 0.7000 0.7000 7.36e-06 6g66-a1-m1-cB_6g66-a1-m1-cC, 6g66-a1-m1-cC_6g66-a1-m1-cD
52 6g66-a1-m1-cB 30 30 0.7241 0.7000 0.7000 7.36e-06 6g66-a1-m1-cB_6g66-a1-m1-cC
53 6g66-a1-m1-cA 30 30 0.7241 0.7000 0.7000 7.36e-06 6g66-a1-m1-cA_6g66-a1-m1-cG
54 7nfp-a1-m1-cG 29 29 0.5172 0.5172 0.5172 4.26e-05 7nfp-a1-m1-cF_7nfp-a1-m1-cG
55 7nfp-a1-m1-cF 29 29 0.5172 0.5172 0.5172 4.26e-05 7nfp-a1-m1-cF_7nfp-a1-m1-cG
56 7zr3-a1-m1-cB 315 15 0.2759 0.0254 0.5333 5.0 7zr3-a1-m1-cB_7zr3-a1-m1-cA
57 7zr3-a1-m1-cA 319 15 0.2759 0.0251 0.5333 5.8 7zr3-a1-m1-cB_7zr3-a1-m1-cA
58 7t1c-a1-m4-cA 453 17 0.3103 0.0199 0.5294 7.1 7t1c-a1-m1-cA_7t1c-a1-m4-cA, 7t1c-a1-m2-cA_7t1c-a1-m4-cA
59 7t1c-a1-m2-cA 453 17 0.3103 0.0199 0.5294 7.1 7t1c-a1-m2-cA_7t1c-a1-m4-cA
60 7t1c-a1-m1-cA 453 17 0.3103 0.0199 0.5294 7.1 7t1c-a1-m1-cA_7t1c-a1-m4-cA
61 7f79-a1-m1-cF 455 24 0.3448 0.0220 0.4167 9.2 7f79-a1-m1-cE_7f79-a1-m1-cF, 7f79-a1-m1-cF_7f79-a1-m1-cC
62 7f79-a1-m1-cC 458 24 0.3448 0.0218 0.4167 9.3 7f79-a1-m1-cA_7f79-a1-m1-cC, 7f79-a1-m1-cF_7f79-a1-m1-cC
63 7f79-a1-m1-cA 456 24 0.3448 0.0219 0.4167 9.3 7f79-a1-m1-cA_7f79-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600