Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=30)
GEIAALKQEIAALKKENAALKEIAALKQGY

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 4dzm-a2-m3-cB 30 30 1.0000 1.0000 1.0000 5.56e-13 4dzm-a2-m1-cB_4dzm-a2-m3-cB
2 4dzm-a2-m1-cB 30 30 1.0000 1.0000 1.0000 5.56e-13 4dzm-a2-m1-cB_4dzm-a2-m3-cB
3 4dzn-a1-m1-cB 31 30 0.9667 0.9355 0.9667 1.72e-11 4dzn-a1-m1-cA_4dzn-a1-m1-cB
4 4dzn-a1-m1-cA 31 30 0.9667 0.9355 0.9667 1.72e-11 4dzn-a1-m1-cA_4dzn-a1-m1-cB
5 6i1j-a2-m6-cA 30 30 0.8000 0.8000 0.8000 1.67e-07 6i1j-a2-m1-cA_6i1j-a2-m6-cA, 6i1j-a2-m2-cA_6i1j-a2-m6-cA
6 6i1j-a2-m2-cA 30 30 0.8000 0.8000 0.8000 1.67e-07 6i1j-a2-m2-cA_6i1j-a2-m6-cA
7 6i1j-a2-m1-cA 30 30 0.8000 0.8000 0.8000 1.67e-07 6i1j-a2-m1-cA_6i1j-a2-m6-cA
8 3r4h-a2-m2-cF 28 28 0.6667 0.7143 0.7143 1.81e-06 3r4h-a2-m1-cE_3r4h-a2-m2-cF, 3r4h-a2-m2-cE_3r4h-a2-m2-cF
9 4dzk-a1-m3-cA 29 29 0.7667 0.7931 0.7931 2.02e-05 4dzk-a1-m2-cA_4dzk-a1-m3-cA
10 4dzk-a1-m2-cA 29 29 0.7667 0.7931 0.7931 2.02e-05 4dzk-a1-m2-cA_4dzk-a1-m3-cA
11 3r4h-a2-m2-cE 26 26 0.6000 0.6923 0.6923 8.71e-05 3r4h-a2-m2-cE_3r4h-a2-m2-cF
12 3r4h-a2-m1-cE 26 26 0.6000 0.6923 0.6923 8.71e-05 3r4h-a2-m1-cE_3r4h-a2-m2-cF
13 7qdk-a1-m1-cC 29 28 0.7333 0.7586 0.7857 1.16e-04 7qdk-a1-m1-cB_7qdk-a1-m1-cC
14 7qdk-a1-m1-cB 29 28 0.7333 0.7586 0.7857 1.16e-04 7qdk-a1-m1-cB_7qdk-a1-m1-cC
15 7q1q-a1-m1-cB 30 20 0.5000 0.5000 0.7500 0.012 7q1q-a1-m1-cA_7q1q-a1-m1-cB
16 7q1q-a1-m1-cB 30 20 0.4000 0.4000 0.6000 4.4 7q1q-a1-m1-cA_7q1q-a1-m1-cB
17 7q1q-a1-m1-cA 30 20 0.5000 0.5000 0.7500 0.012 7q1q-a1-m1-cA_7q1q-a1-m1-cB
18 7q1q-a1-m1-cA 30 20 0.4000 0.4000 0.6000 4.4 7q1q-a1-m1-cA_7q1q-a1-m1-cB
19 7l33-a3-m7-cC 30 26 0.6000 0.6000 0.6923 0.030 7l33-a3-m4-cC_7l33-a3-m7-cC
20 7l33-a3-m7-cC 30 20 0.4667 0.4667 0.7000 0.16 7l33-a3-m4-cC_7l33-a3-m7-cC
21 7l33-a3-m7-cC 30 16 0.4000 0.4000 0.7500 0.95 7l33-a3-m4-cC_7l33-a3-m7-cC
22 7l33-a3-m4-cC 30 26 0.6000 0.6000 0.6923 0.030 7l33-a3-m4-cC_7l33-a3-m7-cC
23 7l33-a3-m4-cC 30 20 0.4667 0.4667 0.7000 0.16 7l33-a3-m4-cC_7l33-a3-m7-cC
24 7l33-a3-m4-cC 30 16 0.4000 0.4000 0.7500 0.95 7l33-a3-m4-cC_7l33-a3-m7-cC
25 5u59-a1-m2-cA 26 20 0.5667 0.6538 0.8500 0.040 5u59-a1-m1-cA_5u59-a1-m2-cA
26 5u59-a1-m2-cA 26 27 0.7000 0.8077 0.7778 0.39 5u59-a1-m1-cA_5u59-a1-m2-cA
27 5u59-a1-m2-cA 26 21 0.6000 0.6923 0.8571 1.5 5u59-a1-m1-cA_5u59-a1-m2-cA
28 5u59-a1-m1-cA 26 20 0.5667 0.6538 0.8500 0.040 5u59-a1-m1-cA_5u59-a1-m2-cA
29 5u59-a1-m1-cA 26 27 0.7000 0.8077 0.7778 0.39 5u59-a1-m1-cA_5u59-a1-m2-cA
30 5u59-a1-m1-cA 26 21 0.6000 0.6923 0.8571 1.5 5u59-a1-m1-cA_5u59-a1-m2-cA
31 7q1r-a1-m1-cB 30 20 0.4667 0.4667 0.7000 0.046 7q1r-a1-m1-cA_7q1r-a1-m1-cB
32 7q1r-a1-m1-cA 30 20 0.4667 0.4667 0.7000 0.046 7q1r-a1-m1-cA_7q1r-a1-m1-cB
33 1g6u-a2-m3-cB 48 24 0.4667 0.2917 0.5833 0.44 1g6u-a2-m1-cA_1g6u-a2-m3-cB, 1g6u-a2-m3-cA_1g6u-a2-m3-cB
34 1g6u-a2-m3-cA 48 24 0.4667 0.2917 0.5833 0.44 1g6u-a2-m3-cA_1g6u-a2-m3-cB
35 1g6u-a2-m1-cA 48 24 0.4667 0.2917 0.5833 0.44 1g6u-a2-m1-cA_1g6u-a2-m3-cB
36 2j5u-a1-m9-cB 201 21 0.4333 0.0647 0.6190 0.45 2j5u-a1-m10-cB_2j5u-a1-m9-cB, 2j5u-a1-m6-cB_2j5u-a1-m9-cB, 2j5u-a1-m9-cB_2j5u-a1-m9-cA
37 2j5u-a1-m6-cB 201 21 0.4333 0.0647 0.6190 0.45 2j5u-a1-m6-cB_2j5u-a1-m9-cB
38 2j5u-a1-m10-cB 201 21 0.4333 0.0647 0.6190 0.45 2j5u-a1-m10-cB_2j5u-a1-m9-cB
39 2j5u-a1-m9-cA 210 21 0.4333 0.0619 0.6190 0.45 2j5u-a1-m9-cB_2j5u-a1-m9-cA
40 5u5c-a2-m2-cF 27 27 0.4667 0.5185 0.5185 0.49 5u5c-a2-m2-cE_5u5c-a2-m2-cF
41 5u5c-a2-m2-cE 27 27 0.4667 0.5185 0.5185 0.49 5u5c-a2-m2-cE_5u5c-a2-m2-cF
42 7bas-a1-m1-cE 29 29 0.5333 0.5517 0.5517 0.82 7bas-a1-m1-cA_7bas-a1-m1-cE
43 7bas-a1-m1-cA 29 29 0.5333 0.5517 0.5517 0.82 7bas-a1-m1-cA_7bas-a1-m1-cE
44 7bau-a2-m1-cI 29 29 0.5000 0.5172 0.5172 1.5 7bau-a2-m1-cH_7bau-a2-m1-cI
45 7nfp-a1-m1-cG 29 29 0.5000 0.5172 0.5172 1.9 7nfp-a1-m1-cF_7nfp-a1-m1-cG
46 7nfp-a1-m1-cF 29 29 0.5000 0.5172 0.5172 1.9 7nfp-a1-m1-cF_7nfp-a1-m1-cG
47 7bau-a2-m1-cH 28 24 0.4667 0.5000 0.5833 2.5 7bau-a2-m1-cH_7bau-a2-m1-cI
48 5ed9-a1-m1-cA 71 29 0.4000 0.1690 0.4138 2.5 5ed9-a1-m1-cA_5ed9-a1-m1-cB
49 5ed9-a1-m1-cB 72 29 0.4000 0.1667 0.4138 2.5 5ed9-a1-m1-cA_5ed9-a1-m1-cB
50 3a5t-a2-m1-cA 90 27 0.4000 0.1333 0.4444 4.0 3a5t-a2-m1-cA_3a5t-a2-m1-cB
51 3a5t-a2-m1-cB 90 27 0.4000 0.1333 0.4444 4.1 3a5t-a2-m1-cA_3a5t-a2-m1-cB
52 2wvr-a1-m2-cA 70 23 0.4333 0.1857 0.5652 4.7 2wvr-a1-m2-cA_2wvr-a1-m2-cB
53 2wvr-a1-m2-cB 74 23 0.4333 0.1757 0.5652 5.4 2wvr-a1-m2-cA_2wvr-a1-m2-cB
54 4g1a-a1-m1-cC 27 26 0.5000 0.5556 0.5769 5.8 4g1a-a1-m1-cB_4g1a-a1-m1-cC
55 6ys4-a3-m1-cE 102 19 0.2667 0.0784 0.4211 6.0 6ys4-a3-m1-cF_6ys4-a3-m1-cE
56 6ys4-a3-m1-cF 100 19 0.2667 0.0800 0.4211 6.4 6ys4-a3-m1-cF_6ys4-a3-m1-cE
57 6q5o-a1-m4-cA 30 30 0.5333 0.5333 0.5333 8.8 6q5o-a1-m2-cA_6q5o-a1-m4-cA
58 6q5o-a1-m2-cA 30 30 0.5333 0.5333 0.5333 8.8 6q5o-a1-m2-cA_6q5o-a1-m4-cA
59 2zxx-a2-m1-cD 64 23 0.4000 0.1875 0.5217 9.6 2zxx-a2-m1-cD_2zxx-a2-m1-cE
60 2zxx-a2-m1-cE 77 23 0.4000 0.1558 0.5217 9.7 2zxx-a2-m1-cD_2zxx-a2-m1-cE

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600