Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=30)
GEIAQAIKEIAKAIKEIAWAIKEIAQAIKG

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 6g67-a1-m4-cB 30 30 1.0000 1.0000 1.0000 9.17e-12 6g67-a1-m2-cA_6g67-a1-m4-cB, 6g67-a1-m4-cA_6g67-a1-m4-cB
2 6g67-a1-m4-cA 30 30 1.0000 1.0000 1.0000 9.17e-12 6g67-a1-m1-cB_6g67-a1-m4-cA, 6g67-a1-m4-cA_6g67-a1-m4-cB
3 6g67-a1-m3-cB 30 30 1.0000 1.0000 1.0000 9.17e-12 6g67-a1-m1-cA_6g67-a1-m3-cB, 6g67-a1-m3-cA_6g67-a1-m3-cB
4 6g67-a1-m3-cA 30 30 1.0000 1.0000 1.0000 9.17e-12 6g67-a1-m2-cB_6g67-a1-m3-cA, 6g67-a1-m3-cA_6g67-a1-m3-cB
5 6g67-a1-m2-cB 30 30 1.0000 1.0000 1.0000 9.17e-12 6g67-a1-m2-cB_6g67-a1-m3-cA
6 6g67-a1-m2-cA 30 30 1.0000 1.0000 1.0000 9.17e-12 6g67-a1-m2-cA_6g67-a1-m4-cB
7 6g67-a1-m1-cB 30 30 1.0000 1.0000 1.0000 9.17e-12 6g67-a1-m1-cB_6g67-a1-m4-cA
8 6g67-a1-m1-cA 30 30 1.0000 1.0000 1.0000 9.17e-12 6g67-a1-m1-cA_6g67-a1-m3-cB
9 6g66-a1-m1-cG 30 30 0.8667 0.8667 0.8667 1.91e-11 6g66-a1-m1-cA_6g66-a1-m1-cG, 6g66-a1-m1-cF_6g66-a1-m1-cG
10 6g66-a1-m1-cF 30 30 0.8667 0.8667 0.8667 1.91e-11 6g66-a1-m1-cE_6g66-a1-m1-cF, 6g66-a1-m1-cF_6g66-a1-m1-cG
11 6g66-a1-m1-cE 30 30 0.8667 0.8667 0.8667 1.91e-11 6g66-a1-m1-cD_6g66-a1-m1-cE, 6g66-a1-m1-cE_6g66-a1-m1-cF
12 6g66-a1-m1-cD 30 30 0.8667 0.8667 0.8667 1.91e-11 6g66-a1-m1-cC_6g66-a1-m1-cD, 6g66-a1-m1-cD_6g66-a1-m1-cE
13 6g66-a1-m1-cC 30 30 0.8667 0.8667 0.8667 1.91e-11 6g66-a1-m1-cB_6g66-a1-m1-cC, 6g66-a1-m1-cC_6g66-a1-m1-cD
14 6g66-a1-m1-cB 30 30 0.8667 0.8667 0.8667 1.91e-11 6g66-a1-m1-cB_6g66-a1-m1-cC
15 6g66-a1-m1-cA 30 30 0.8667 0.8667 0.8667 1.91e-11 6g66-a1-m1-cA_6g66-a1-m1-cG
16 6g65-a4-m3-cL 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a4-m1-cJ_6g65-a4-m3-cL, 6g65-a4-m3-cK_6g65-a4-m3-cL
17 6g65-a4-m3-cK 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a4-m3-cJ_6g65-a4-m3-cK, 6g65-a4-m3-cK_6g65-a4-m3-cL
18 6g65-a4-m3-cJ 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a4-m1-cL_6g65-a4-m3-cJ, 6g65-a4-m3-cJ_6g65-a4-m3-cK
19 6g65-a4-m1-cL 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a4-m1-cK_6g65-a4-m1-cL, 6g65-a4-m1-cL_6g65-a4-m3-cJ
20 6g65-a4-m1-cK 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a4-m1-cK_6g65-a4-m1-cL
21 6g65-a4-m1-cJ 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a4-m1-cJ_6g65-a4-m3-cL
22 6g65-a3-m3-cI 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a3-m1-cG_6g65-a3-m3-cI, 6g65-a3-m3-cH_6g65-a3-m3-cI
23 6g65-a3-m3-cH 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a3-m3-cG_6g65-a3-m3-cH, 6g65-a3-m3-cH_6g65-a3-m3-cI
24 6g65-a3-m3-cG 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a3-m1-cI_6g65-a3-m3-cG, 6g65-a3-m3-cG_6g65-a3-m3-cH
25 6g65-a3-m1-cI 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a3-m1-cH_6g65-a3-m1-cI, 6g65-a3-m1-cI_6g65-a3-m3-cG
26 6g65-a3-m1-cH 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a3-m1-cH_6g65-a3-m1-cI
27 6g65-a3-m1-cG 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a3-m1-cG_6g65-a3-m3-cI
28 6g65-a2-m2-cF 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a2-m1-cD_6g65-a2-m2-cF, 6g65-a2-m2-cE_6g65-a2-m2-cF
29 6g65-a2-m2-cE 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a2-m2-cD_6g65-a2-m2-cE, 6g65-a2-m2-cE_6g65-a2-m2-cF
30 6g65-a2-m2-cD 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a2-m1-cF_6g65-a2-m2-cD, 6g65-a2-m2-cD_6g65-a2-m2-cE
31 6g65-a2-m1-cF 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a2-m1-cE_6g65-a2-m1-cF, 6g65-a2-m1-cF_6g65-a2-m2-cD
32 6g65-a2-m1-cE 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a2-m1-cE_6g65-a2-m1-cF
33 6g65-a2-m1-cD 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a2-m1-cD_6g65-a2-m2-cF
34 6g65-a1-m2-cC 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a1-m1-cA_6g65-a1-m2-cC, 6g65-a1-m2-cB_6g65-a1-m2-cC
35 6g65-a1-m2-cB 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a1-m2-cA_6g65-a1-m2-cB, 6g65-a1-m2-cB_6g65-a1-m2-cC
36 6g65-a1-m2-cA 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a1-m1-cC_6g65-a1-m2-cA, 6g65-a1-m2-cA_6g65-a1-m2-cB
37 6g65-a1-m1-cC 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a1-m1-cB_6g65-a1-m1-cC, 6g65-a1-m1-cC_6g65-a1-m2-cA
38 6g65-a1-m1-cB 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a1-m1-cB_6g65-a1-m1-cC
39 6g65-a1-m1-cA 30 30 0.7333 0.7333 0.7333 3.28e-11 6g65-a1-m1-cA_6g65-a1-m2-cC
40 7nfh-a1-m1-cG 30 30 0.8667 0.8667 0.8667 5.15e-11 7nfh-a1-m1-cC_7nfh-a1-m1-cG, 7nfh-a1-m1-cE_7nfh-a1-m1-cG
41 7nfh-a1-m1-cF 30 30 0.8667 0.8667 0.8667 5.15e-11 7nfh-a1-m1-cD_7nfh-a1-m1-cF
42 7nfh-a1-m1-cE 30 30 0.8667 0.8667 0.8667 5.15e-11 7nfh-a1-m1-cA_7nfh-a1-m1-cE, 7nfh-a1-m1-cE_7nfh-a1-m1-cG
43 7nfh-a1-m1-cD 30 30 0.8667 0.8667 0.8667 5.15e-11 7nfh-a1-m1-cB_7nfh-a1-m1-cD, 7nfh-a1-m1-cD_7nfh-a1-m1-cF
44 7nfh-a1-m1-cC 30 30 0.8667 0.8667 0.8667 5.15e-11 7nfh-a1-m1-cC_7nfh-a1-m1-cG
45 7nfh-a1-m1-cB 30 30 0.8667 0.8667 0.8667 5.15e-11 7nfh-a1-m1-cB_7nfh-a1-m1-cD
46 7nfh-a1-m1-cA 30 30 0.8667 0.8667 0.8667 5.15e-11 7nfh-a1-m1-cA_7nfh-a1-m1-cE
47 6g6f-a1-m1-cG 30 30 0.7333 0.7333 0.7333 2.10e-10 6g6f-a1-m1-cA_6g6f-a1-m1-cG
48 6g6f-a1-m1-cC 30 30 0.7333 0.7333 0.7333 2.10e-10 6g6f-a1-m1-cB_6g6f-a1-m1-cC
49 6g6f-a1-m1-cB 30 30 0.7333 0.7333 0.7333 2.10e-10 6g6f-a1-m1-cB_6g6f-a1-m1-cC
50 6g6f-a1-m1-cA 30 30 0.7333 0.7333 0.7333 2.10e-10 6g6f-a1-m1-cA_6g6f-a1-m1-cG, 6g6f-a1-m1-cH_6g6f-a1-m1-cA
51 6g6d-a1-m2-cC 30 30 0.6000 0.6000 0.6000 5.46e-10 6g6d-a1-m1-cA_6g6d-a1-m2-cC, 6g6d-a1-m2-cB_6g6d-a1-m2-cC
52 6g6d-a1-m2-cB 30 30 0.6000 0.6000 0.6000 5.46e-10 6g6d-a1-m2-cA_6g6d-a1-m2-cB, 6g6d-a1-m2-cB_6g6d-a1-m2-cC
53 6g6d-a1-m2-cA 30 30 0.6000 0.6000 0.6000 5.46e-10 6g6d-a1-m1-cC_6g6d-a1-m2-cA, 6g6d-a1-m2-cA_6g6d-a1-m2-cB
54 6g6d-a1-m1-cC 30 30 0.6000 0.6000 0.6000 5.46e-10 6g6d-a1-m1-cB_6g6d-a1-m1-cC, 6g6d-a1-m1-cC_6g6d-a1-m2-cA
55 6g6d-a1-m1-cB 30 30 0.6000 0.6000 0.6000 5.46e-10 6g6d-a1-m1-cA_6g6d-a1-m1-cB, 6g6d-a1-m1-cB_6g6d-a1-m1-cC
56 6g6d-a1-m1-cA 30 30 0.6000 0.6000 0.6000 5.46e-10 6g6d-a1-m1-cA_6g6d-a1-m1-cB, 6g6d-a1-m1-cA_6g6d-a1-m2-cC
57 6g6f-a1-m1-cH 29 29 0.7000 0.7241 0.7241 1.83e-09 6g6f-a1-m1-cH_6g6f-a1-m1-cA
58 8a09-a1-m3-cB 29 29 0.7000 0.7241 0.7241 9.02e-08 8a09-a1-m3-cA_8a09-a1-m3-cB
59 8a09-a1-m3-cA 29 29 0.7000 0.7241 0.7241 9.02e-08 8a09-a1-m3-cA_8a09-a1-m3-cB
60 7bau-a2-m1-cI 29 30 0.8333 0.8621 0.8333 2.79e-07 7bau-a2-m1-cH_7bau-a2-m1-cI
61 7bas-a1-m1-cE 29 30 0.7000 0.7241 0.7000 1.34e-06 7bas-a1-m1-cA_7bas-a1-m1-cE
62 7bas-a1-m1-cA 29 30 0.7000 0.7241 0.7000 1.34e-06 7bas-a1-m1-cA_7bas-a1-m1-cE
63 7boa-a1-m1-cD 29 30 0.7000 0.7241 0.7000 2.09e-06 7boa-a1-m1-cA_7boa-a1-m1-cD
64 7boa-a1-m1-cA 29 30 0.7000 0.7241 0.7000 2.09e-06 7boa-a1-m1-cA_7boa-a1-m1-cD
65 7a1t-a1-m1-cF 29 30 0.7000 0.7241 0.7000 2.20e-06 7a1t-a1-m1-cA_7a1t-a1-m1-cF
66 7a1t-a1-m1-cB 29 30 0.7000 0.7241 0.7000 2.20e-06 7a1t-a1-m1-cA_7a1t-a1-m1-cB
67 7a1t-a1-m1-cA 29 30 0.7000 0.7241 0.7000 2.20e-06 7a1t-a1-m1-cA_7a1t-a1-m1-cB, 7a1t-a1-m1-cA_7a1t-a1-m1-cF
68 7bau-a2-m1-cH 28 29 0.8000 0.8571 0.8276 2.35e-06 7bau-a2-m1-cH_7bau-a2-m1-cI
69 6xy1-a1-m1-cD 30 30 0.5333 0.5333 0.5333 2.76e-05 6xy1-a1-m1-cB_6xy1-a1-m1-cD
70 6xy1-a1-m1-cB 30 30 0.5333 0.5333 0.5333 2.76e-05 6xy1-a1-m1-cB_6xy1-a1-m1-cD
71 7nfp-a1-m1-cG 29 30 0.6000 0.6207 0.6000 7.47e-05 7nfp-a1-m1-cF_7nfp-a1-m1-cG
72 7nfp-a1-m1-cF 29 30 0.6000 0.6207 0.6000 7.47e-05 7nfp-a1-m1-cF_7nfp-a1-m1-cG
73 8a3g-a1-m2-cB 30 26 0.5333 0.5333 0.6154 5.64e-04 8a3g-a1-m1-cA_8a3g-a1-m2-cB, 8a3g-a1-m2-cA_8a3g-a1-m2-cB
74 8a3g-a1-m2-cA 30 26 0.5333 0.5333 0.6154 5.64e-04 8a3g-a1-m2-cA_8a3g-a1-m2-cB
75 8a3g-a1-m1-cA 30 26 0.5333 0.5333 0.6154 5.64e-04 8a3g-a1-m1-cA_8a3g-a1-m2-cB
76 4pnd-a1-m1-cC 30 30 0.4667 0.4667 0.4667 0.029 4pnd-a1-m1-cB_4pnd-a1-m1-cC
77 6xxz-a1-m2-cB 30 30 0.4333 0.4333 0.4333 0.14 6xxz-a1-m2-cA_6xxz-a1-m2-cB
78 6xxz-a1-m2-cA 30 30 0.4333 0.4333 0.4333 0.14 6xxz-a1-m2-cA_6xxz-a1-m2-cB
79 5eon-a1-m2-cC 29 24 0.5000 0.5172 0.6250 0.22 5eon-a1-m2-cA_5eon-a1-m2-cC
80 5eon-a1-m2-cB 29 24 0.5000 0.5172 0.6250 0.22 5eon-a1-m2-cA_5eon-a1-m2-cB
81 5eon-a1-m2-cA 29 24 0.5000 0.5172 0.6250 0.22 5eon-a1-m2-cA_5eon-a1-m2-cB, 5eon-a1-m2-cA_5eon-a1-m2-cC
82 4pnd-a1-m1-cB 29 29 0.4333 0.4483 0.4483 0.26 4pnd-a1-m1-cB_4pnd-a1-m1-cC
83 6xy0-a1-m1-cD 30 30 0.4333 0.4333 0.4333 0.41 6xy0-a1-m1-cA_6xy0-a1-m1-cD, 6xy0-a1-m1-cB_6xy0-a1-m1-cD
84 6xy0-a1-m1-cB 30 30 0.4333 0.4333 0.4333 0.41 6xy0-a1-m1-cB_6xy0-a1-m1-cD
85 6xy0-a1-m1-cA 30 30 0.4333 0.4333 0.4333 0.41 6xy0-a1-m1-cA_6xy0-a1-m1-cD
86 4pn8-a1-m1-cE 30 30 0.3333 0.3333 0.3333 1.1 4pn8-a1-m1-cD_4pn8-a1-m1-cE
87 4pn8-a1-m1-cD 30 30 0.3333 0.3333 0.3333 1.1 4pn8-a1-m1-cD_4pn8-a1-m1-cE
88 6q5o-a1-m4-cA 30 24 0.3333 0.3333 0.4167 1.1 6q5o-a1-m2-cA_6q5o-a1-m4-cA
89 6q5o-a1-m2-cA 30 24 0.3333 0.3333 0.4167 1.1 6q5o-a1-m2-cA_6q5o-a1-m4-cA
90 5j10-a1-m1-cB 70 25 0.4000 0.1714 0.4800 2.3 5j10-a1-m1-cA_5j10-a1-m1-cB
91 5j10-a1-m1-cA 70 25 0.4000 0.1714 0.4800 2.3 5j10-a1-m1-cA_5j10-a1-m1-cB
92 6q5q-a1-m4-cA 32 24 0.4000 0.3750 0.5000 3.5 6q5q-a1-m1-cA_6q5q-a1-m4-cA, 6q5q-a1-m2-cA_6q5q-a1-m4-cA
93 6q5q-a1-m2-cA 32 24 0.4000 0.3750 0.5000 3.5 6q5q-a1-m2-cA_6q5q-a1-m4-cA
94 6q5q-a1-m1-cA 32 24 0.4000 0.3750 0.5000 3.5 6q5q-a1-m1-cA_6q5q-a1-m4-cA
95 7q62-a1-m1-cA 1223 16 0.3000 0.0074 0.5625 10.0 7q62-a1-m1-cB_7q62-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600