Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=29)
GEIAQTIKEIAKTIKEIATIKEIAQTIKG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7bau-a2-m1-cI 29 29 1.0000 1.0000 1.0000 1.45e-11 7bau-a2-m1-cH_7bau-a2-m1-cI
2 7bas-a1-m1-cE 29 29 0.8621 0.8621 0.8621 5.24e-11 7bas-a1-m1-cA_7bas-a1-m1-cE
3 7bas-a1-m1-cA 29 29 0.8621 0.8621 0.8621 5.24e-11 7bas-a1-m1-cA_7bas-a1-m1-cE
4 7bau-a2-m1-cH 28 28 0.9655 1.0000 1.0000 1.12e-10 7bau-a2-m1-cH_7bau-a2-m1-cI
5 7a1t-a1-m1-cF 29 29 0.7241 0.7241 0.7241 6.91e-08 7a1t-a1-m1-cA_7a1t-a1-m1-cF
6 7a1t-a1-m1-cB 29 29 0.7241 0.7241 0.7241 6.91e-08 7a1t-a1-m1-cA_7a1t-a1-m1-cB
7 7a1t-a1-m1-cA 29 29 0.7241 0.7241 0.7241 6.91e-08 7a1t-a1-m1-cA_7a1t-a1-m1-cB, 7a1t-a1-m1-cA_7a1t-a1-m1-cF
8 6g6d-a1-m2-cC 30 30 0.5862 0.5667 0.5667 1.07e-07 6g6d-a1-m1-cA_6g6d-a1-m2-cC, 6g6d-a1-m2-cB_6g6d-a1-m2-cC
9 6g6d-a1-m2-cB 30 30 0.5862 0.5667 0.5667 1.07e-07 6g6d-a1-m2-cA_6g6d-a1-m2-cB, 6g6d-a1-m2-cB_6g6d-a1-m2-cC
10 6g6d-a1-m2-cA 30 30 0.5862 0.5667 0.5667 1.07e-07 6g6d-a1-m1-cC_6g6d-a1-m2-cA, 6g6d-a1-m2-cA_6g6d-a1-m2-cB
11 6g6d-a1-m1-cC 30 30 0.5862 0.5667 0.5667 1.07e-07 6g6d-a1-m1-cB_6g6d-a1-m1-cC, 6g6d-a1-m1-cC_6g6d-a1-m2-cA
12 6g6d-a1-m1-cB 30 30 0.5862 0.5667 0.5667 1.07e-07 6g6d-a1-m1-cA_6g6d-a1-m1-cB, 6g6d-a1-m1-cB_6g6d-a1-m1-cC
13 6g6d-a1-m1-cA 30 30 0.5862 0.5667 0.5667 1.07e-07 6g6d-a1-m1-cA_6g6d-a1-m1-cB, 6g6d-a1-m1-cA_6g6d-a1-m2-cC
14 6g67-a1-m4-cB 30 30 0.8621 0.8333 0.8333 2.70e-07 6g67-a1-m2-cA_6g67-a1-m4-cB, 6g67-a1-m4-cA_6g67-a1-m4-cB
15 6g67-a1-m4-cA 30 30 0.8621 0.8333 0.8333 2.70e-07 6g67-a1-m1-cB_6g67-a1-m4-cA, 6g67-a1-m4-cA_6g67-a1-m4-cB
16 6g67-a1-m3-cB 30 30 0.8621 0.8333 0.8333 2.70e-07 6g67-a1-m1-cA_6g67-a1-m3-cB, 6g67-a1-m3-cA_6g67-a1-m3-cB
17 6g67-a1-m3-cA 30 30 0.8621 0.8333 0.8333 2.70e-07 6g67-a1-m2-cB_6g67-a1-m3-cA, 6g67-a1-m3-cA_6g67-a1-m3-cB
18 6g67-a1-m2-cB 30 30 0.8621 0.8333 0.8333 2.70e-07 6g67-a1-m2-cB_6g67-a1-m3-cA
19 6g67-a1-m2-cA 30 30 0.8621 0.8333 0.8333 2.70e-07 6g67-a1-m2-cA_6g67-a1-m4-cB
20 6g67-a1-m1-cB 30 30 0.8621 0.8333 0.8333 2.70e-07 6g67-a1-m1-cB_6g67-a1-m4-cA
21 6g67-a1-m1-cA 30 30 0.8621 0.8333 0.8333 2.70e-07 6g67-a1-m1-cA_6g67-a1-m3-cB
22 6g66-a1-m1-cG 30 30 0.7241 0.7000 0.7000 6.43e-07 6g66-a1-m1-cA_6g66-a1-m1-cG, 6g66-a1-m1-cF_6g66-a1-m1-cG
23 6g66-a1-m1-cF 30 30 0.7241 0.7000 0.7000 6.43e-07 6g66-a1-m1-cE_6g66-a1-m1-cF, 6g66-a1-m1-cF_6g66-a1-m1-cG
24 6g66-a1-m1-cE 30 30 0.7241 0.7000 0.7000 6.43e-07 6g66-a1-m1-cD_6g66-a1-m1-cE, 6g66-a1-m1-cE_6g66-a1-m1-cF
25 6g66-a1-m1-cD 30 30 0.7241 0.7000 0.7000 6.43e-07 6g66-a1-m1-cC_6g66-a1-m1-cD, 6g66-a1-m1-cD_6g66-a1-m1-cE
26 6g66-a1-m1-cC 30 30 0.7241 0.7000 0.7000 6.43e-07 6g66-a1-m1-cB_6g66-a1-m1-cC, 6g66-a1-m1-cC_6g66-a1-m1-cD
27 6g66-a1-m1-cB 30 30 0.7241 0.7000 0.7000 6.43e-07 6g66-a1-m1-cB_6g66-a1-m1-cC
28 6g66-a1-m1-cA 30 30 0.7241 0.7000 0.7000 6.43e-07 6g66-a1-m1-cA_6g66-a1-m1-cG
29 6g65-a4-m3-cL 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a4-m1-cJ_6g65-a4-m3-cL, 6g65-a4-m3-cK_6g65-a4-m3-cL
30 6g65-a4-m3-cK 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a4-m3-cJ_6g65-a4-m3-cK, 6g65-a4-m3-cK_6g65-a4-m3-cL
31 6g65-a4-m3-cJ 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a4-m1-cL_6g65-a4-m3-cJ, 6g65-a4-m3-cJ_6g65-a4-m3-cK
32 6g65-a4-m1-cL 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a4-m1-cK_6g65-a4-m1-cL, 6g65-a4-m1-cL_6g65-a4-m3-cJ
33 6g65-a4-m1-cK 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a4-m1-cK_6g65-a4-m1-cL
34 6g65-a4-m1-cJ 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a4-m1-cJ_6g65-a4-m3-cL
35 6g65-a3-m3-cI 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a3-m1-cG_6g65-a3-m3-cI, 6g65-a3-m3-cH_6g65-a3-m3-cI
36 6g65-a3-m3-cH 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a3-m3-cG_6g65-a3-m3-cH, 6g65-a3-m3-cH_6g65-a3-m3-cI
37 6g65-a3-m3-cG 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a3-m1-cI_6g65-a3-m3-cG, 6g65-a3-m3-cG_6g65-a3-m3-cH
38 6g65-a3-m1-cI 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a3-m1-cH_6g65-a3-m1-cI, 6g65-a3-m1-cI_6g65-a3-m3-cG
39 6g65-a3-m1-cH 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a3-m1-cH_6g65-a3-m1-cI
40 6g65-a3-m1-cG 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a3-m1-cG_6g65-a3-m3-cI
41 6g65-a2-m2-cF 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a2-m1-cD_6g65-a2-m2-cF, 6g65-a2-m2-cE_6g65-a2-m2-cF
42 6g65-a2-m2-cE 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a2-m2-cD_6g65-a2-m2-cE, 6g65-a2-m2-cE_6g65-a2-m2-cF
43 6g65-a2-m2-cD 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a2-m1-cF_6g65-a2-m2-cD, 6g65-a2-m2-cD_6g65-a2-m2-cE
44 6g65-a2-m1-cF 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a2-m1-cE_6g65-a2-m1-cF, 6g65-a2-m1-cF_6g65-a2-m2-cD
45 6g65-a2-m1-cE 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a2-m1-cE_6g65-a2-m1-cF
46 6g65-a2-m1-cD 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a2-m1-cD_6g65-a2-m2-cF
47 6g65-a1-m2-cC 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a1-m1-cA_6g65-a1-m2-cC, 6g65-a1-m2-cB_6g65-a1-m2-cC
48 6g65-a1-m2-cB 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a1-m2-cA_6g65-a1-m2-cB, 6g65-a1-m2-cB_6g65-a1-m2-cC
49 6g65-a1-m2-cA 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a1-m1-cC_6g65-a1-m2-cA, 6g65-a1-m2-cA_6g65-a1-m2-cB
50 6g65-a1-m1-cC 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a1-m1-cB_6g65-a1-m1-cC, 6g65-a1-m1-cC_6g65-a1-m2-cA
51 6g65-a1-m1-cB 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a1-m1-cB_6g65-a1-m1-cC
52 6g65-a1-m1-cA 30 30 0.5862 0.5667 0.5667 1.24e-06 6g65-a1-m1-cA_6g65-a1-m2-cC
53 7nfh-a1-m1-cG 30 30 0.7241 0.7000 0.7000 1.89e-06 7nfh-a1-m1-cC_7nfh-a1-m1-cG, 7nfh-a1-m1-cE_7nfh-a1-m1-cG
54 7nfh-a1-m1-cF 30 30 0.7241 0.7000 0.7000 1.89e-06 7nfh-a1-m1-cD_7nfh-a1-m1-cF
55 7nfh-a1-m1-cE 30 30 0.7241 0.7000 0.7000 1.89e-06 7nfh-a1-m1-cA_7nfh-a1-m1-cE, 7nfh-a1-m1-cE_7nfh-a1-m1-cG
56 7nfh-a1-m1-cD 30 30 0.7241 0.7000 0.7000 1.89e-06 7nfh-a1-m1-cB_7nfh-a1-m1-cD, 7nfh-a1-m1-cD_7nfh-a1-m1-cF
57 7nfh-a1-m1-cC 30 30 0.7241 0.7000 0.7000 1.89e-06 7nfh-a1-m1-cC_7nfh-a1-m1-cG
58 7nfh-a1-m1-cB 30 30 0.7241 0.7000 0.7000 1.89e-06 7nfh-a1-m1-cB_7nfh-a1-m1-cD
59 7nfh-a1-m1-cA 30 30 0.7241 0.7000 0.7000 1.89e-06 7nfh-a1-m1-cA_7nfh-a1-m1-cE
60 6g6f-a1-m1-cG 30 30 0.5862 0.5667 0.5667 6.45e-06 6g6f-a1-m1-cA_6g6f-a1-m1-cG
61 6g6f-a1-m1-cC 30 30 0.5862 0.5667 0.5667 6.45e-06 6g6f-a1-m1-cB_6g6f-a1-m1-cC
62 6g6f-a1-m1-cB 30 30 0.5862 0.5667 0.5667 6.45e-06 6g6f-a1-m1-cB_6g6f-a1-m1-cC
63 6g6f-a1-m1-cA 30 30 0.5862 0.5667 0.5667 6.45e-06 6g6f-a1-m1-cA_6g6f-a1-m1-cG, 6g6f-a1-m1-cH_6g6f-a1-m1-cA
64 8a09-a1-m3-cB 29 29 0.6897 0.6897 0.6897 2.49e-05 8a09-a1-m3-cA_8a09-a1-m3-cB
65 8a09-a1-m3-cA 29 29 0.6897 0.6897 0.6897 2.49e-05 8a09-a1-m3-cA_8a09-a1-m3-cB
66 7nfp-a1-m1-cG 29 29 0.4828 0.4828 0.4828 3.61e-05 7nfp-a1-m1-cF_7nfp-a1-m1-cG
67 7nfp-a1-m1-cF 29 29 0.4828 0.4828 0.4828 3.61e-05 7nfp-a1-m1-cF_7nfp-a1-m1-cG
68 6g6f-a1-m1-cH 29 29 0.5517 0.5517 0.5517 6.12e-05 6g6f-a1-m1-cH_6g6f-a1-m1-cA
69 6xy1-a1-m1-cD 30 30 0.5172 0.5000 0.5000 0.053 6xy1-a1-m1-cB_6xy1-a1-m1-cD
70 6xy1-a1-m1-cB 30 30 0.5172 0.5000 0.5000 0.053 6xy1-a1-m1-cB_6xy1-a1-m1-cD
71 4dzn-a1-m1-cB 31 29 0.5517 0.5161 0.5517 0.15 4dzn-a1-m1-cA_4dzn-a1-m1-cB
72 4dzn-a1-m1-cA 31 29 0.5517 0.5161 0.5517 0.15 4dzn-a1-m1-cA_4dzn-a1-m1-cB
73 6g6e-a1-m1-cB 26 26 0.6552 0.7308 0.7308 0.17 6g6e-a1-m1-cA_6g6e-a1-m1-cB
74 6g6e-a1-m1-cA 26 26 0.6552 0.7308 0.7308 0.17 6g6e-a1-m1-cA_6g6e-a1-m1-cB
75 8a3g-a1-m2-cB 30 25 0.5172 0.5000 0.6000 0.28 8a3g-a1-m1-cA_8a3g-a1-m2-cB, 8a3g-a1-m2-cA_8a3g-a1-m2-cB
76 8a3g-a1-m2-cA 30 25 0.5172 0.5000 0.6000 0.28 8a3g-a1-m2-cA_8a3g-a1-m2-cB
77 8a3g-a1-m1-cA 30 25 0.5172 0.5000 0.6000 0.28 8a3g-a1-m1-cA_8a3g-a1-m2-cB
78 4dzm-a2-m3-cB 30 29 0.5172 0.5000 0.5172 1.5 4dzm-a2-m1-cB_4dzm-a2-m3-cB
79 4dzm-a2-m1-cB 30 29 0.5172 0.5000 0.5172 1.5 4dzm-a2-m1-cB_4dzm-a2-m3-cB
80 1kea-a2-m2-cA 217 26 0.3448 0.0461 0.3846 4.7 1kea-a2-m1-cA_1kea-a2-m2-cA
81 1kea-a2-m1-cA 217 26 0.3448 0.0461 0.3846 4.7 1kea-a2-m1-cA_1kea-a2-m2-cA
82 7qdk-a1-m1-cC 29 29 0.3793 0.3793 0.3793 8.9 7qdk-a1-m1-cB_7qdk-a1-m1-cC
83 7qdk-a1-m1-cB 29 29 0.3793 0.3793 0.3793 8.9 7qdk-a1-m1-cB_7qdk-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600