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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=25)
GEIQALKEIKALKEIALKEIQALKG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7qwb-a1-m1-cE 25 25 1.0000 1.0000 1.0000 3.17e-09 7qwb-a1-m1-cA_7qwb-a1-m1-cE, 7qwb-a1-m1-cB_7qwb-a1-m1-cE, 7qwb-a1-m1-cD_7qwb-a1-m1-cE, 7qwb-a1-m1-cF_7qwb-a1-m1-cE
2 7qwb-a1-m1-cD 24 24 0.9600 1.0000 1.0000 2.74e-08 7qwb-a1-m1-cD_7qwb-a1-m1-cE
3 7qwb-a1-m1-cC 24 24 0.9600 1.0000 1.0000 2.74e-08 7qwb-a1-m1-cA_7qwb-a1-m1-cC
4 7qwb-a1-m1-cB 24 24 0.9600 1.0000 1.0000 2.74e-08 7qwb-a1-m1-cB_7qwb-a1-m1-cE
5 7qwb-a1-m1-cA 24 24 0.9600 1.0000 1.0000 2.74e-08 7qwb-a1-m1-cA_7qwb-a1-m1-cC, 7qwb-a1-m1-cA_7qwb-a1-m1-cE, 7qwb-a1-m1-cF_7qwb-a1-m1-cA
6 7qwb-a1-m1-cF 23 23 0.9200 1.0000 1.0000 2.55e-07 7qwb-a1-m1-cF_7qwb-a1-m1-cA, 7qwb-a1-m1-cF_7qwb-a1-m1-cE
7 3niz-a2-m2-cA 288 24 0.4400 0.0382 0.4583 1.6 3niz-a2-m1-cA_3niz-a2-m2-cA
8 3niz-a2-m1-cA 288 24 0.4400 0.0382 0.4583 1.6 3niz-a2-m1-cA_3niz-a2-m2-cA
9 6sg4-a1-m1-cC 260 22 0.3600 0.0346 0.4091 8.5 6sg4-a1-m1-cC_6sg4-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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