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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
GELPIAPVDRLIRKAGAERVSEQAAKVLAEYLEEYAIEIAKKAVEFARHAGRKTVKVEDI
KLAIKS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ku5-a1-m1-cB 66 66 1.0000 1.0000 1.0000 2.95e-40 1ku5-a1-m1-cA_1ku5-a1-m1-cB
2 1ku5-a1-m1-cA 66 66 1.0000 1.0000 1.0000 2.95e-40 1ku5-a1-m1-cA_1ku5-a1-m1-cB
3 1b67-a1-m1-cA 68 65 0.6212 0.6029 0.6308 2.48e-21 1b67-a1-m1-cB_1b67-a1-m1-cA
4 5t5k-a1-m1-cF 67 64 0.5758 0.5672 0.5938 5.49e-21 5t5k-a1-m1-cD_5t5k-a1-m1-cF, 5t5k-a1-m1-cE_5t5k-a1-m1-cF
5 5t5k-a1-m1-cE 67 64 0.5758 0.5672 0.5938 5.49e-21 5t5k-a1-m1-cE_5t5k-a1-m1-cF
6 5t5k-a1-m1-cD 67 64 0.5758 0.5672 0.5938 5.49e-21 5t5k-a1-m1-cD_5t5k-a1-m1-cF
7 1b67-a1-m1-cB 65 64 0.6061 0.6154 0.6250 2.13e-20 1b67-a1-m1-cB_1b67-a1-m1-cA
8 1f1e-a1-m2-cA 147 59 0.3485 0.1565 0.3898 6.29e-06 1f1e-a1-m1-cA_1f1e-a1-m2-cA
9 1f1e-a1-m1-cA 147 59 0.3485 0.1565 0.3898 6.29e-06 1f1e-a1-m1-cA_1f1e-a1-m2-cA
10 2yfw-a2-m1-cD 71 62 0.3333 0.3099 0.3548 4.83e-04 2yfw-a2-m1-cD_2yfw-a2-m1-cF
11 2yfw-a2-m1-cF 72 62 0.3333 0.3056 0.3548 5.98e-04 2yfw-a2-m1-cD_2yfw-a2-m1-cF
12 7x58-a1-m1-cH 73 62 0.3333 0.3014 0.3548 0.001 7x58-a1-m1-cB_7x58-a1-m1-cH
13 7x58-a1-m1-cB 73 62 0.3333 0.3014 0.3548 0.001 7x58-a1-m1-cB_7x58-a1-m1-cH
14 1taf-a2-m5-cA 68 53 0.1970 0.1912 0.2453 0.033 1taf-a2-m4-cA_1taf-a2-m5-cA
15 1taf-a2-m4-cA 68 53 0.1970 0.1912 0.2453 0.033 1taf-a2-m4-cA_1taf-a2-m5-cA
16 6kxv-a1-m1-cA 94 66 0.2879 0.2021 0.2879 0.069 6kxv-a1-m1-cA_6kxv-a1-m1-cE
17 6kxv-a1-m1-cE 95 66 0.2879 0.2000 0.2879 0.081 6kxv-a1-m1-cA_6kxv-a1-m1-cE
18 7da0-a1-m2-cB 95 42 0.2424 0.1684 0.3810 0.088 7da0-a1-m1-cB_7da0-a1-m2-cB
19 7da0-a1-m1-cB 95 42 0.2424 0.1684 0.3810 0.088 7da0-a1-m1-cB_7da0-a1-m2-cB
20 7z0o-a1-m1-cA 94 62 0.3030 0.2128 0.3226 0.17 7z0o-a1-m1-cA_7z0o-a1-m1-cC
21 7z0o-a1-m1-cC 97 62 0.3030 0.2062 0.3226 0.17 7z0o-a1-m1-cA_7z0o-a1-m1-cC
22 4jjn-a1-m1-cA 98 62 0.3030 0.2041 0.3226 0.18 4jjn-a1-m1-cE_4jjn-a1-m1-cA
23 4jjn-a1-m1-cE 96 62 0.3030 0.2083 0.3226 0.19 4jjn-a1-m1-cE_4jjn-a1-m1-cA
24 4zmh-a1-m1-cB 907 68 0.2727 0.0198 0.2647 1.1 4zmh-a1-m1-cB_4zmh-a1-m1-cA
25 4zmh-a1-m1-cA 910 68 0.2727 0.0198 0.2647 1.1 4zmh-a1-m1-cB_4zmh-a1-m1-cA
26 3k2w-a2-m1-cF 483 38 0.1667 0.0228 0.2895 2.9 3k2w-a2-m1-cF_3k2w-a2-m1-cG, 3k2w-a2-m1-cF_3k2w-a2-m1-cH
27 3k2w-a2-m1-cH 486 38 0.1667 0.0226 0.2895 2.9 3k2w-a2-m1-cF_3k2w-a2-m1-cH, 3k2w-a2-m1-cG_3k2w-a2-m1-cH
28 3k2w-a2-m1-cG 484 38 0.1667 0.0227 0.2895 3.1 3k2w-a2-m1-cF_3k2w-a2-m1-cG, 3k2w-a2-m1-cG_3k2w-a2-m1-cH
29 8f86-a1-m1-cE 95 62 0.2879 0.2000 0.3065 3.6 8f86-a1-m1-cE_8f86-a1-m1-cA
30 2f2h-a1-m1-cF 773 42 0.2424 0.0207 0.3810 4.3 2f2h-a1-m1-cB_2f2h-a1-m1-cF, 2f2h-a1-m1-cE_2f2h-a1-m1-cF
31 2f2h-a1-m1-cE 773 42 0.2424 0.0207 0.3810 4.3 2f2h-a1-m1-cE_2f2h-a1-m1-cF
32 2f2h-a1-m1-cB 773 42 0.2424 0.0207 0.3810 4.3 2f2h-a1-m1-cB_2f2h-a1-m1-cF
33 8f86-a1-m1-cA 107 62 0.2879 0.1776 0.3065 4.9 8f86-a1-m1-cE_8f86-a1-m1-cA
34 3tou-a1-m1-cA 212 35 0.1970 0.0613 0.3714 5.4 3tou-a1-m1-cB_3tou-a1-m1-cA
35 3tou-a1-m1-cB 202 35 0.1970 0.0644 0.3714 5.8 3tou-a1-m1-cB_3tou-a1-m1-cA
36 3w5s-a1-m1-cB 350 39 0.2121 0.0400 0.3590 8.1 3w5s-a1-m1-cA_3w5s-a1-m1-cB
37 3w5s-a1-m1-cA 350 39 0.2121 0.0400 0.3590 8.1 3w5s-a1-m1-cA_3w5s-a1-m1-cB
38 3k12-a2-m1-cF 112 29 0.1364 0.0804 0.3103 8.3 3k12-a2-m1-cF_3k12-a2-m1-cE
39 3k12-a2-m1-cE 113 29 0.1364 0.0796 0.3103 8.8 3k12-a2-m1-cF_3k12-a2-m1-cE
40 7d69-a1-m1-cA 90 67 0.3030 0.2222 0.2985 9.3 7d69-a1-m1-cA_7d69-a1-m1-cE
41 7d69-a1-m1-cE 99 68 0.3030 0.2020 0.2941 9.5 7d69-a1-m1-cA_7d69-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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