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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=45)
GERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDHQYQFLED

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2yvr-a1-m1-cB 45 45 1.0000 1.0000 1.0000 8.15e-29 2yvr-a1-m1-cA_2yvr-a1-m1-cB
2 2yvr-a1-m1-cA 45 45 1.0000 1.0000 1.0000 8.15e-29 2yvr-a1-m1-cA_2yvr-a1-m1-cB
3 7z36-a1-m1-cB 446 45 1.0000 0.1009 1.0000 9.52e-28 7z36-a1-m1-cA_7z36-a1-m1-cB
4 6qaj-a1-m1-cB 441 45 0.9778 0.0998 0.9778 9.66e-27 6qaj-a1-m1-cA_6qaj-a1-m1-cB
5 6qaj-a1-m1-cA 439 45 0.9778 0.1002 0.9778 1.02e-26 6qaj-a1-m1-cA_6qaj-a1-m1-cB
6 7z36-a1-m1-cA 433 41 0.8889 0.0924 0.9756 3.55e-24 7z36-a1-m1-cA_7z36-a1-m1-cB
7 3q1d-a1-m2-cA 47 34 0.2889 0.2766 0.3824 0.19 3q1d-a1-m1-cA_3q1d-a1-m2-cA
8 3q1d-a1-m1-cA 47 34 0.2889 0.2766 0.3824 0.19 3q1d-a1-m1-cA_3q1d-a1-m2-cA
9 7xv2-a1-m2-cA 382 35 0.2889 0.0340 0.3714 0.25 7xv2-a1-m1-cA_7xv2-a1-m2-cA
10 7xv2-a1-m1-cA 382 35 0.2889 0.0340 0.3714 0.25 7xv2-a1-m1-cA_7xv2-a1-m2-cA
11 7xt2-a1-m1-cB 388 35 0.2667 0.0309 0.3429 1.4 7xt2-a1-m1-cA_7xt2-a1-m1-cB
12 7xt2-a1-m1-cA 388 35 0.2667 0.0309 0.3429 1.5 7xt2-a1-m1-cA_7xt2-a1-m1-cB
13 3ozp-a1-m2-cA 572 15 0.2222 0.0175 0.6667 1.6 3ozp-a1-m1-cA_3ozp-a1-m2-cA
14 3ozp-a1-m1-cA 572 15 0.2222 0.0175 0.6667 1.6 3ozp-a1-m1-cA_3ozp-a1-m2-cA
15 5va4-a1-m3-cA 123 37 0.2889 0.1057 0.3514 5.2 5va4-a1-m2-cA_5va4-a1-m3-cA
16 5va4-a1-m2-cA 123 37 0.2889 0.1057 0.3514 5.2 5va4-a1-m2-cA_5va4-a1-m3-cA
17 3cih-a1-m2-cA 690 27 0.2667 0.0174 0.4444 6.6 3cih-a1-m1-cA_3cih-a1-m2-cA
18 3cih-a1-m1-cA 690 27 0.2667 0.0174 0.4444 6.6 3cih-a1-m1-cA_3cih-a1-m2-cA
19 4dn7-a1-m1-cB 396 25 0.2000 0.0227 0.3600 8.2 4dn7-a1-m1-cA_4dn7-a1-m1-cB
20 4dn7-a1-m1-cA 396 25 0.2000 0.0227 0.3600 8.2 4dn7-a1-m1-cA_4dn7-a1-m1-cB
21 1jdp-a1-m1-cB 395 29 0.2444 0.0278 0.3793 9.0 1jdp-a1-m1-cB_1jdp-a1-m1-cA
22 1jdp-a1-m1-cA 396 29 0.2444 0.0278 0.3793 9.0 1jdp-a1-m1-cB_1jdp-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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