Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
GESVVATQLIPINTALTPAMMAGKVTNPSGIPFAEMSQIVGKQVNTPVAKGQTLMPDMVK
TYVP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ur6-a2-m3-cA 64 64 1.0000 1.0000 1.0000 1.15e-40 4ur6-a2-m1-cA_4ur6-a2-m3-cA
2 4ur6-a2-m1-cA 64 64 1.0000 1.0000 1.0000 1.15e-40 4ur6-a2-m1-cA_4ur6-a2-m3-cA
3 5xqr-a1-m1-cA 64 64 0.9531 0.9531 0.9531 6.44e-38 5xqr-a1-m1-cB_5xqr-a1-m1-cA
4 5xqr-a1-m1-cB 61 61 0.9062 0.9508 0.9508 2.42e-35 5xqr-a1-m1-cB_5xqr-a1-m1-cA
5 1tj7-a2-m2-cB 451 25 0.1562 0.0222 0.4000 5.8 1tj7-a2-m1-cB_1tj7-a2-m2-cB, 1tj7-a2-m2-cB_1tj7-a2-m1-cA, 1tj7-a2-m2-cB_1tj7-a2-m2-cA
6 1tj7-a2-m1-cB 451 25 0.1562 0.0222 0.4000 5.8 1tj7-a2-m1-cB_1tj7-a2-m2-cB
7 1tj7-a2-m2-cA 455 25 0.1562 0.0220 0.4000 5.8 1tj7-a2-m2-cB_1tj7-a2-m2-cA
8 1tj7-a2-m1-cA 455 25 0.1562 0.0220 0.4000 5.8 1tj7-a2-m2-cB_1tj7-a2-m1-cA
9 2e9f-a1-m1-cC 448 25 0.1562 0.0223 0.4000 6.5 2e9f-a1-m1-cC_2e9f-a1-m1-cD
10 2e9f-a1-m1-cD 449 25 0.1562 0.0223 0.4000 6.5 2e9f-a1-m1-cA_2e9f-a1-m1-cD, 2e9f-a1-m1-cC_2e9f-a1-m1-cD, 2e9f-a1-m1-cD_2e9f-a1-m1-cB
11 2e9f-a1-m1-cA 449 25 0.1562 0.0223 0.4000 6.5 2e9f-a1-m1-cA_2e9f-a1-m1-cD
12 2e9f-a1-m1-cB 450 25 0.1562 0.0222 0.4000 6.5 2e9f-a1-m1-cD_2e9f-a1-m1-cB
13 2pff-a1-m2-cH 2006 46 0.2031 0.0065 0.2826 6.6 2pff-a1-m2-cE_2pff-a1-m2-cH
14 2pff-a1-m2-cE 2006 46 0.2031 0.0065 0.2826 6.6 2pff-a1-m2-cE_2pff-a1-m2-cH
15 5odq-a1-m1-cG 652 47 0.2344 0.0230 0.3191 7.9 5odq-a1-m1-cA_5odq-a1-m1-cG
16 5odq-a1-m1-cA 652 47 0.2344 0.0230 0.3191 7.9 5odq-a1-m1-cA_5odq-a1-m1-cG
17 1auw-a1-m1-cC 447 46 0.2344 0.0336 0.3261 8.5 1auw-a1-m1-cB_1auw-a1-m1-cC
18 1auw-a1-m1-cB 447 46 0.2344 0.0336 0.3261 8.5 1auw-a1-m1-cA_1auw-a1-m1-cB, 1auw-a1-m1-cB_1auw-a1-m1-cC
19 1auw-a1-m1-cA 447 46 0.2344 0.0336 0.3261 8.5 1auw-a1-m1-cA_1auw-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600