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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
GESVVATQLIPINTALTPVMMEGKVTNPSGIPFAEMSQIVGKQVNTPVAKGQTLMPGMVK
T

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5xqr-a1-m1-cB 61 61 1.0000 1.0000 1.0000 1.04e-37 5xqr-a1-m1-cB_5xqr-a1-m1-cA
2 5xqr-a1-m1-cA 64 61 1.0000 0.9531 1.0000 1.17e-37 5xqr-a1-m1-cB_5xqr-a1-m1-cA
3 4ur6-a2-m3-cA 64 61 0.9508 0.9062 0.9508 2.31e-35 4ur6-a2-m1-cA_4ur6-a2-m3-cA
4 4ur6-a2-m1-cA 64 61 0.9508 0.9062 0.9508 2.31e-35 4ur6-a2-m1-cA_4ur6-a2-m3-cA
5 2pff-a1-m2-cH 2006 47 0.2295 0.0070 0.2979 1.3 2pff-a1-m2-cE_2pff-a1-m2-cH
6 2pff-a1-m2-cE 2006 47 0.2295 0.0070 0.2979 1.3 2pff-a1-m2-cE_2pff-a1-m2-cH
7 1tj7-a2-m2-cB 451 25 0.1639 0.0222 0.4000 5.2 1tj7-a2-m1-cB_1tj7-a2-m2-cB, 1tj7-a2-m2-cB_1tj7-a2-m1-cA, 1tj7-a2-m2-cB_1tj7-a2-m2-cA
8 1tj7-a2-m1-cB 451 25 0.1639 0.0222 0.4000 5.2 1tj7-a2-m1-cB_1tj7-a2-m2-cB
9 1tj7-a2-m2-cA 455 25 0.1639 0.0220 0.4000 5.2 1tj7-a2-m2-cB_1tj7-a2-m2-cA
10 1tj7-a2-m1-cA 455 25 0.1639 0.0220 0.4000 5.2 1tj7-a2-m2-cB_1tj7-a2-m1-cA
11 2e9f-a1-m1-cC 448 25 0.1639 0.0223 0.4000 5.8 2e9f-a1-m1-cC_2e9f-a1-m1-cD
12 2e9f-a1-m1-cD 449 25 0.1639 0.0223 0.4000 5.8 2e9f-a1-m1-cA_2e9f-a1-m1-cD, 2e9f-a1-m1-cC_2e9f-a1-m1-cD, 2e9f-a1-m1-cD_2e9f-a1-m1-cB
13 2e9f-a1-m1-cA 449 25 0.1639 0.0223 0.4000 5.8 2e9f-a1-m1-cA_2e9f-a1-m1-cD
14 2e9f-a1-m1-cB 450 25 0.1639 0.0222 0.4000 5.8 2e9f-a1-m1-cD_2e9f-a1-m1-cB
15 3vu1-a3-m1-cB 490 27 0.1639 0.0204 0.3704 6.9 3vu1-a3-m1-cA_3vu1-a3-m1-cB
16 3vu1-a3-m1-cA 488 27 0.1639 0.0205 0.3704 7.3 3vu1-a3-m1-cA_3vu1-a3-m1-cB

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Reference:
Jacob Schwartz et al.

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