Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
GESWQKRYDSLQKIVEKQQQKMDQLRSQVQSLEQEVAQEEGTSQALREEAQRRDSALQQL
RTAVKELSVQNQDLIEKNLTLQEHLRQA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5oi7-a1-m1-cB 88 88 1.0000 1.0000 1.0000 5.19e-56 5oi7-a1-m1-cA_5oi7-a1-m1-cB
2 5oi7-a1-m1-cA 88 88 1.0000 1.0000 1.0000 5.19e-56 5oi7-a1-m1-cA_5oi7-a1-m1-cB
3 7do6-a2-m1-cH 247 56 0.1818 0.0648 0.2857 2.5 7do6-a2-m1-cE_7do6-a2-m1-cH, 7do6-a2-m1-cH_7do6-a2-m1-cG
4 7do6-a2-m1-cE 247 56 0.1818 0.0648 0.2857 2.5 7do6-a2-m1-cE_7do6-a2-m1-cH
5 7do6-a1-m1-cA 247 56 0.1818 0.0648 0.2857 2.5 7do6-a1-m1-cA_7do6-a1-m1-cC
6 7do6-a2-m1-cG 248 56 0.1818 0.0645 0.2857 2.5 7do6-a2-m1-cH_7do6-a2-m1-cG
7 7do6-a1-m1-cC 256 56 0.1818 0.0625 0.2857 2.6 7do6-a1-m1-cA_7do6-a1-m1-cC
8 8glv-a1-m1-cCp 1075 70 0.2045 0.0167 0.2571 3.3 8glv-a1-m1-cCp_8glv-a1-m1-cCq
9 8glv-a1-m1-cCq 1076 70 0.2045 0.0167 0.2571 3.4 8glv-a1-m1-cCp_8glv-a1-m1-cCq
10 6qa0-a1-m1-cB 140 56 0.1818 0.1143 0.2857 3.9 6qa0-a1-m1-cA_6qa0-a1-m1-cB
11 6qa0-a1-m1-cA 140 56 0.1818 0.1143 0.2857 3.9 6qa0-a1-m1-cA_6qa0-a1-m1-cB
12 3hoa-a1-m1-cB 509 40 0.1477 0.0255 0.3250 6.2 3hoa-a1-m1-cA_3hoa-a1-m1-cB
13 3hoa-a1-m1-cA 509 40 0.1477 0.0255 0.3250 6.2 3hoa-a1-m1-cA_3hoa-a1-m1-cB
14 7vpr-a2-m1-cD 253 33 0.1818 0.0632 0.4848 7.0 7vpr-a2-m1-cD_7vpr-a2-m1-cC
15 7vpr-a2-m1-cC 282 33 0.1818 0.0567 0.4848 7.9 7vpr-a2-m1-cD_7vpr-a2-m1-cC
16 6kos-a1-m1-cA 101 42 0.1477 0.1287 0.3095 8.2 6kos-a1-m1-cB_6kos-a1-m1-cA
17 6kos-a1-m1-cB 97 42 0.1477 0.1340 0.3095 9.3 6kos-a1-m1-cB_6kos-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600