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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=35)
GEVEELEKKFKELWKGPRRGEIEELHKKFHELIKG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1qp6-a1-m1-cB 35 35 1.0000 1.0000 1.0000 2.17e-17 1qp6-a1-m1-cA_1qp6-a1-m1-cB
2 1qp6-a1-m1-cA 35 35 1.0000 1.0000 1.0000 2.17e-17 1qp6-a1-m1-cA_1qp6-a1-m1-cB
3 2azj-a1-m1-cA 276 40 0.4000 0.0507 0.3500 3.4 2azj-a1-m1-cB_2azj-a1-m1-cA
4 5c3m-a2-m3-cD 409 18 0.2857 0.0244 0.5556 3.7 5c3m-a2-m3-cD_5c3m-a2-m3-cB
5 2azj-a1-m1-cB 274 40 0.4000 0.0511 0.3500 3.9 2azj-a1-m1-cB_2azj-a1-m1-cA
6 3gfz-a1-m1-cA 393 36 0.3429 0.0305 0.3333 4.6 3gfz-a1-m1-cA_3gfz-a1-m1-cB
7 3gfz-a1-m1-cB 394 36 0.3429 0.0305 0.3333 5.5 3gfz-a1-m1-cA_3gfz-a1-m1-cB
8 5c3m-a2-m3-cB 411 18 0.2857 0.0243 0.5556 6.5 5c3m-a2-m1-cB_5c3m-a2-m3-cB, 5c3m-a2-m3-cD_5c3m-a2-m3-cB
9 5c3m-a2-m1-cB 411 18 0.2857 0.0243 0.5556 6.5 5c3m-a2-m1-cB_5c3m-a2-m3-cB
10 6j94-a1-m1-cB 457 18 0.2000 0.0153 0.3889 9.2 6j94-a1-m1-cA_6j94-a1-m1-cB
11 6j94-a1-m1-cA 457 18 0.2000 0.0153 0.3889 9.4 6j94-a1-m1-cA_6j94-a1-m1-cB
12 3ng7-a1-m2-cX 427 22 0.2286 0.0187 0.3636 10.0 3ng7-a1-m1-cX_3ng7-a1-m2-cX
13 3ng7-a1-m1-cX 427 22 0.2286 0.0187 0.3636 10.0 3ng7-a1-m1-cX_3ng7-a1-m2-cX

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Reference:
Jacob Schwartz et al.

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