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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=32)
GFGNSRGGGAGLGNNQGSNMGGGMNFGEFSIN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6n3c-a1-m1-cT 32 32 1.0000 1.0000 1.0000 8.20e-14 6n3c-a1-m1-cP_6n3c-a1-m1-cT, 6n3c-a1-m1-cS_6n3c-a1-m1-cT
2 6n3c-a1-m1-cS 32 32 1.0000 1.0000 1.0000 8.20e-14 6n3c-a1-m1-cO_6n3c-a1-m1-cS, 6n3c-a1-m1-cQ_6n3c-a1-m1-cS, 6n3c-a1-m1-cS_6n3c-a1-m1-cT
3 6n3c-a1-m1-cQ 32 32 1.0000 1.0000 1.0000 8.20e-14 6n3c-a1-m1-cQ_6n3c-a1-m1-cS
4 6n3c-a1-m1-cP 32 32 1.0000 1.0000 1.0000 8.20e-14 6n3c-a1-m1-cP_6n3c-a1-m1-cT
5 6n3c-a1-m1-cO 32 32 1.0000 1.0000 1.0000 8.20e-14 6n3c-a1-m1-cO_6n3c-a1-m1-cS
6 7q3u-a1-m1-cC 71 32 0.9688 0.4366 0.9688 4.23e-13 7q3u-a1-m1-cA_7q3u-a1-m1-cC
7 7q3u-a1-m1-cA 71 32 0.9688 0.4366 0.9688 4.23e-13 7q3u-a1-m1-cA_7q3u-a1-m1-cC
8 7py2-a1-m1-cD 79 32 0.9688 0.3924 0.9688 5.78e-13 7py2-a1-m1-cC_7py2-a1-m1-cD
9 7py2-a1-m1-cC 79 32 0.9688 0.3924 0.9688 5.78e-13 7py2-a1-m1-cC_7py2-a1-m1-cD
10 7kwz-a1-m1-cE 139 32 0.9688 0.2230 0.9688 2.48e-12 7kwz-a1-m1-cD_7kwz-a1-m1-cE
11 7kwz-a1-m1-cD 139 32 0.9688 0.2230 0.9688 2.48e-12 7kwz-a1-m1-cD_7kwz-a1-m1-cE
12 3men-a2-m1-cC 337 29 0.3750 0.0356 0.4138 5.5 3men-a2-m1-cC_3men-a2-m1-cD
13 3men-a2-m1-cD 339 29 0.3750 0.0354 0.4138 6.7 3men-a2-m1-cC_3men-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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