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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
GFGNVGEDDLHPQIKKGAIFSPEEFDGIDKTDIFPLKKKRDPDSDHFKKTGGDDDNPFLY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8adn-a1-m1-c4 60 60 1.0000 1.0000 1.0000 1.53e-37 8adn-a1-m1-c3_8adn-a1-m1-c4
2 8adn-a1-m1-c3 60 60 1.0000 1.0000 1.0000 1.53e-37 8adn-a1-m1-c3_8adn-a1-m1-c4
3 4aqn-a1-m1-cA 340 33 0.2333 0.0412 0.4242 1.6 4aqn-a1-m1-cB_4aqn-a1-m1-cA
4 4aqn-a1-m1-cB 338 33 0.2333 0.0414 0.4242 1.6 4aqn-a1-m1-cB_4aqn-a1-m1-cA
5 4epf-a1-m1-cB 329 33 0.2333 0.0426 0.4242 1.7 4epf-a1-m1-cA_4epf-a1-m1-cB
6 4epf-a1-m1-cA 327 33 0.2333 0.0428 0.4242 1.7 4epf-a1-m1-cA_4epf-a1-m1-cB
7 3c8n-a2-m1-cD 322 34 0.2167 0.0404 0.3824 2.8 3c8n-a2-m1-cD_3c8n-a2-m1-cC
8 3c8n-a2-m1-cC 324 34 0.2167 0.0401 0.3824 2.9 3c8n-a2-m1-cD_3c8n-a2-m1-cC
9 6wlb-a1-m1-cC 720 25 0.1500 0.0125 0.3600 3.9 6wlb-a1-m1-cB_6wlb-a1-m1-cC
10 6wlb-a1-m1-cB 720 25 0.1500 0.0125 0.3600 3.9 6wlb-a1-m1-cB_6wlb-a1-m1-cC
11 2x3j-a1-m1-cB 578 18 0.1000 0.0104 0.3333 7.5 2x3j-a1-m1-cB_2x3j-a1-m1-cA
12 2x3j-a1-m1-cA 586 18 0.1000 0.0102 0.3333 7.6 2x3j-a1-m1-cB_2x3j-a1-m1-cA
13 2v3m-a2-m1-cD 93 40 0.2167 0.1398 0.3250 7.9 2v3m-a2-m1-cD_2v3m-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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