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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=39)
GFGTSPLTPSARISALNIVGDLLRKVGALESKLAACRNF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6kzj-a1-m1-cC 42 39 1.0000 0.9286 1.0000 2.20e-22 6kzj-a1-m1-cB_6kzj-a1-m1-cC
2 6kzj-a1-m1-cB 39 39 1.0000 1.0000 1.0000 2.56e-22 6kzj-a1-m1-cB_6kzj-a1-m1-cC
3 2x6p-a1-m1-cC 29 17 0.2564 0.3448 0.5882 4.0 2x6p-a1-m1-cB_2x6p-a1-m1-cC
4 2x6p-a1-m1-cB 29 17 0.2564 0.3448 0.5882 4.0 2x6p-a1-m1-cB_2x6p-a1-m1-cC
5 7f5v-a1-m1-cD 690 17 0.2564 0.0145 0.5882 4.2 7f5v-a1-m1-cA_7f5v-a1-m1-cD
6 7f5v-a1-m1-cA 690 17 0.2564 0.0145 0.5882 4.2 7f5v-a1-m1-cA_7f5v-a1-m1-cD
7 7f5t-a1-m1-cD 674 17 0.2564 0.0148 0.5882 4.4 7f5t-a1-m1-cB_7f5t-a1-m1-cD
8 7f5t-a1-m1-cB 674 17 0.2564 0.0148 0.5882 4.4 7f5t-a1-m1-cB_7f5t-a1-m1-cD
9 7f5u-a1-m1-cD 685 17 0.2564 0.0146 0.5882 4.4 7f5u-a1-m1-cB_7f5u-a1-m1-cD
10 7f5u-a1-m1-cB 685 17 0.2564 0.0146 0.5882 4.4 7f5u-a1-m1-cB_7f5u-a1-m1-cD
11 4k5c-a1-m1-cA 170 27 0.3333 0.0765 0.4815 5.7 4k5c-a1-m1-cA_4k5c-a1-m1-cB
12 4k5c-a1-m1-cB 171 27 0.3333 0.0760 0.4815 5.7 4k5c-a1-m1-cA_4k5c-a1-m1-cB
13 4g1a-a1-m1-cC 27 17 0.2308 0.3333 0.5294 7.0 4g1a-a1-m1-cB_4g1a-a1-m1-cC
14 4g1a-a1-m1-cB 24 17 0.2308 0.3750 0.5294 7.2 4g1a-a1-m1-cB_4g1a-a1-m1-cC
15 4guz-a7-m3-cC 284 9 0.2051 0.0282 0.8889 8.6 4guz-a7-m1-cC_4guz-a7-m3-cC
16 4guz-a7-m1-cC 284 9 0.2051 0.0282 0.8889 8.6 4guz-a7-m1-cC_4guz-a7-m3-cC
17 2o1x-a2-m1-cC 538 24 0.2564 0.0186 0.4167 9.0 2o1x-a2-m1-cD_2o1x-a2-m1-cC
18 2o1x-a2-m1-cD 530 24 0.2564 0.0189 0.4167 9.1 2o1x-a2-m1-cD_2o1x-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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