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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
GFNINDRIKELGTLIPKRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQ
LRIQELG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7f09-a2-m1-cC 67 67 1.0000 1.0000 1.0000 8.39e-43 7f09-a2-m1-cD_7f09-a2-m1-cC
2 7f09-a2-m1-cD 65 67 0.9701 1.0000 0.9701 1.52e-39 7f09-a2-m1-cD_7f09-a2-m1-cC
3 7d8s-a2-m1-cC 184 66 0.8358 0.3043 0.8485 1.74e-34 7d8s-a2-m1-cD_7d8s-a2-m1-cC
4 7d8s-a2-m1-cD 175 67 0.8358 0.3200 0.8358 7.42e-33 7d8s-a2-m1-cD_7d8s-a2-m1-cC
5 7d8t-a1-m1-cB 199 72 0.8358 0.2814 0.7778 1.14e-31 7d8t-a1-m1-cA_7d8t-a1-m1-cB
6 7d8t-a1-m1-cA 199 72 0.8358 0.2814 0.7778 1.14e-31 7d8t-a1-m1-cA_7d8t-a1-m1-cB
7 7d8r-a2-m1-cD 174 68 0.8209 0.3161 0.8088 1.68e-31 7d8r-a2-m1-cC_7d8r-a2-m1-cD
8 7eod-a2-m1-cC 66 68 0.8209 0.8333 0.8088 3.97e-30 7eod-a2-m1-cC_7eod-a2-m1-cD
9 6fx5-a1-m1-cB 74 71 0.8060 0.7297 0.7606 1.03e-29 6fx5-a1-m1-cA_6fx5-a1-m1-cB
10 7d8r-a2-m1-cC 168 65 0.7910 0.3155 0.8154 1.53e-29 7d8r-a2-m1-cC_7d8r-a2-m1-cD
11 7eod-a2-m1-cD 69 71 0.8209 0.7971 0.7746 3.54e-29 7eod-a2-m1-cC_7eod-a2-m1-cD
12 7y62-a1-m1-cB 69 67 0.7313 0.7101 0.7313 1.21e-28 7y62-a1-m1-cB_7y62-a1-m1-cA
13 7y62-a1-m1-cA 74 72 0.7313 0.6622 0.6806 8.39e-28 7y62-a1-m1-cB_7y62-a1-m1-cA
14 6fx5-a1-m1-cA 72 69 0.7761 0.7222 0.7536 8.58e-28 6fx5-a1-m1-cA_6fx5-a1-m1-cB
15 1am9-a1-m1-cD 76 44 0.2687 0.2368 0.4091 0.001 1am9-a1-m1-cD_1am9-a1-m1-cC
16 1am9-a1-m1-cC 82 44 0.2687 0.2195 0.4091 0.001 1am9-a1-m1-cD_1am9-a1-m1-cC
17 7f2f-a1-m1-cB 94 48 0.2537 0.1809 0.3542 0.53 7f2f-a1-m1-cA_7f2f-a1-m1-cB
18 7f2f-a1-m1-cA 90 49 0.2537 0.1889 0.3469 0.95 7f2f-a1-m1-cA_7f2f-a1-m1-cB
19 5cdh-a3-m1-cE 326 32 0.2090 0.0429 0.4375 3.2 5cdh-a3-m1-cE_5cdh-a3-m1-cF
20 5cdh-a3-m1-cF 327 32 0.2090 0.0428 0.4375 3.3 5cdh-a3-m1-cE_5cdh-a3-m1-cF
21 5tby-a1-m1-cA 954 30 0.1940 0.0136 0.4333 4.3 5tby-a1-m1-cB_5tby-a1-m1-cA
22 5tby-a1-m1-cB 950 30 0.1940 0.0137 0.4333 4.6 5tby-a1-m1-cB_5tby-a1-m1-cA
23 4ydh-a1-m1-cC 328 52 0.2239 0.0457 0.2885 8.4 4ydh-a1-m1-cC_4ydh-a1-m1-cA
24 4ydh-a1-m1-cA 330 52 0.2239 0.0455 0.2885 9.0 4ydh-a1-m1-cC_4ydh-a1-m1-cA
25 1an4-a1-m1-cB 65 46 0.2239 0.2308 0.3261 9.6 1an4-a1-m1-cA_1an4-a1-m1-cB
26 1an4-a1-m1-cA 65 46 0.2239 0.2308 0.3261 9.6 1an4-a1-m1-cA_1an4-a1-m1-cB
27 5fus-a1-m1-cA 269 28 0.1642 0.0409 0.3929 9.8 5fus-a1-m1-cA_5fus-a1-m1-cC
28 5fus-a1-m1-cC 270 28 0.1642 0.0407 0.3929 9.8 5fus-a1-m1-cA_5fus-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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