Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
GFWGLEVKPGKPQAYNPKKIHVTQATLGTGLSKEKSVIQCSIPIALCSLLPNKIECCPLN
LEEPVEFTVTGDRSIHLSGFLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6j2z-a1-m1-cF 82 82 1.0000 1.0000 1.0000 2.06e-56 6j2z-a1-m1-cF_6j2z-a1-m1-cH
2 6j2z-a2-m1-cC 96 95 1.0000 0.8542 0.8632 1.39e-49 6j2z-a2-m1-cA_6j2z-a2-m1-cC
3 6j2z-a2-m1-cA 96 95 1.0000 0.8542 0.8632 1.39e-49 6j2z-a2-m1-cA_6j2z-a2-m1-cC
4 6j2z-a1-m1-cH 96 95 1.0000 0.8542 0.8632 1.39e-49 6j2z-a1-m1-cF_6j2z-a1-m1-cH
5 7wim-a4-m1-cS 89 88 0.4878 0.4494 0.4545 8.87e-23 7wim-a4-m1-cR_7wim-a4-m1-cS
6 7wim-a4-m1-cR 77 82 0.4634 0.4935 0.4634 8.46e-20 7wim-a4-m1-cR_7wim-a4-m1-cS
7 7vrr-a1-m1-cB 92 90 0.3171 0.2826 0.2889 2.11e-04 7vrr-a1-m1-cB_7vrr-a1-m1-cA
8 7vrr-a1-m1-cA 94 30 0.2073 0.1809 0.5667 3.14e-04 7vrr-a1-m1-cB_7vrr-a1-m1-cA
9 7vmh-a1-m1-cD 92 27 0.1707 0.1522 0.5185 7.19e-04 7vmh-a1-m1-cD_7vmh-a1-m1-cB
10 7vmi-a1-m1-cD 96 52 0.2195 0.1875 0.3462 7.35e-04 7vmi-a1-m1-cB_7vmi-a1-m1-cD
11 7vmi-a1-m1-cB 96 52 0.2195 0.1875 0.3462 7.35e-04 7vmi-a1-m1-cB_7vmi-a1-m1-cD
12 7vmh-a1-m1-cB 96 30 0.1829 0.1562 0.5000 0.004 7vmh-a1-m1-cD_7vmh-a1-m1-cB
13 2nqm-a1-m1-cA 322 15 0.1098 0.0280 0.6000 2.3 2nqm-a1-m1-cA_2nqm-a1-m1-cB
14 2nqm-a1-m1-cB 403 15 0.1098 0.0223 0.6000 2.6 2nqm-a1-m1-cA_2nqm-a1-m1-cB
15 1g8r-a1-m1-cB 403 15 0.1098 0.0223 0.6000 2.6 1g8r-a1-m1-cA_1g8r-a1-m1-cB
16 1g8r-a1-m1-cA 403 15 0.1098 0.0223 0.6000 2.6 1g8r-a1-m1-cA_1g8r-a1-m1-cB
17 1wls-a1-m1-cB 316 39 0.1829 0.0475 0.3846 3.5 1wls-a1-m1-cA_1wls-a1-m1-cB
18 1wls-a1-m1-cA 316 39 0.1829 0.0475 0.3846 3.5 1wls-a1-m1-cA_1wls-a1-m1-cB
19 2jjw-a1-m2-cA 111 53 0.1707 0.1261 0.2642 7.8 2jjw-a1-m1-cA_2jjw-a1-m2-cA
20 2jjw-a1-m1-cA 111 53 0.1707 0.1261 0.2642 7.8 2jjw-a1-m1-cA_2jjw-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600