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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
GFWGLEVKPGKPQAYNPKNEQGKIHVTQATLGTGLSKEKSVIQCSIGDKAPIALCSLLPN
KIECCPLNLEFDDDDEPVEFTVTGDRSIHLSGFLEY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6j2z-a2-m1-cC 96 96 1.0000 1.0000 1.0000 2.36e-68 6j2z-a2-m1-cA_6j2z-a2-m1-cC
2 6j2z-a2-m1-cA 96 96 1.0000 1.0000 1.0000 2.36e-68 6j2z-a2-m1-cA_6j2z-a2-m1-cC
3 6j2z-a1-m1-cH 96 96 1.0000 1.0000 1.0000 2.36e-68 6j2z-a1-m1-cF_6j2z-a1-m1-cH
4 6j2z-a1-m1-cF 82 95 0.8542 1.0000 0.8632 1.63e-49 6j2z-a1-m1-cF_6j2z-a1-m1-cH
5 7wim-a4-m1-cS 89 94 0.4583 0.4944 0.4681 1.00e-26 7wim-a4-m1-cR_7wim-a4-m1-cS
6 7wim-a4-m1-cR 77 94 0.3958 0.4935 0.4043 1.29e-15 7wim-a4-m1-cR_7wim-a4-m1-cS
7 7vrr-a1-m1-cA 94 92 0.3125 0.3191 0.3261 3.39e-05 7vrr-a1-m1-cB_7vrr-a1-m1-cA
8 7vrr-a1-m1-cB 92 92 0.3125 0.3261 0.3261 3.63e-04 7vrr-a1-m1-cB_7vrr-a1-m1-cA
9 7vmf-a1-m1-cE 95 94 0.2708 0.2737 0.2766 0.001 7vmf-a1-m1-cD_7vmf-a1-m1-cE
10 7vmf-a1-m1-cD 95 94 0.2708 0.2737 0.2766 0.001 7vmf-a1-m1-cD_7vmf-a1-m1-cE
11 7vmh-a1-m1-cB 96 98 0.2708 0.2708 0.2653 0.004 7vmh-a1-m1-cD_7vmh-a1-m1-cB
12 7vmh-a1-m1-cD 92 95 0.2708 0.2826 0.2737 0.014 7vmh-a1-m1-cD_7vmh-a1-m1-cB
13 7vmi-a1-m1-cD 96 58 0.2083 0.2083 0.3448 0.015 7vmi-a1-m1-cB_7vmi-a1-m1-cD
14 7vmi-a1-m1-cB 96 58 0.2083 0.2083 0.3448 0.015 7vmi-a1-m1-cB_7vmi-a1-m1-cD
15 2nqm-a1-m1-cA 322 15 0.0938 0.0280 0.6000 3.0 2nqm-a1-m1-cA_2nqm-a1-m1-cB
16 2nqm-a1-m1-cB 403 15 0.0938 0.0223 0.6000 3.4 2nqm-a1-m1-cA_2nqm-a1-m1-cB
17 1g8r-a1-m1-cB 403 15 0.0938 0.0223 0.6000 3.4 1g8r-a1-m1-cA_1g8r-a1-m1-cB
18 1g8r-a1-m1-cA 403 15 0.0938 0.0223 0.6000 3.4 1g8r-a1-m1-cA_1g8r-a1-m1-cB
19 2rhs-a1-m1-cB 786 25 0.1042 0.0127 0.4000 5.9 2rhs-a1-m1-cD_2rhs-a1-m1-cB
20 4hes-a3-m2-cE 256 26 0.1042 0.0391 0.3846 6.5 4hes-a3-m1-cE_4hes-a3-m2-cE
21 4hes-a3-m1-cE 256 26 0.1042 0.0391 0.3846 6.5 4hes-a3-m1-cE_4hes-a3-m2-cE
22 7llk-a1-m1-cI 440 29 0.1458 0.0318 0.4828 8.1 7llk-a1-m1-cI_7llk-a1-m1-cE
23 7llk-a1-m1-cE 440 29 0.1458 0.0318 0.4828 8.1 7llk-a1-m1-cI_7llk-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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