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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
GGAFGKLEAAREEEYFYRKQKEQLERLKNDQIHQAEFHHQQIKEHEEAIQRHKKFLENLT
K

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7dtl-a1-m1-cB 61 61 1.0000 1.0000 1.0000 1.32e-37 7dtl-a1-m1-cA_7dtl-a1-m1-cB
2 7dtl-a1-m1-cA 61 61 1.0000 1.0000 1.0000 1.32e-37 7dtl-a1-m1-cA_7dtl-a1-m1-cB
3 1gmj-a1-m1-cA 65 59 0.4098 0.3846 0.4237 1.01e-06 1gmj-a1-m1-cB_1gmj-a1-m1-cA
4 6j5k-a1-m1-cJ 78 59 0.3934 0.3077 0.4068 6.04e-06 6j5k-a1-m1-cCJ_6j5k-a1-m1-cJ
5 1gmj-a2-m1-cC 59 58 0.3934 0.4068 0.4138 1.08e-05 1gmj-a2-m1-cD_1gmj-a2-m1-cC
6 1gmj-a1-m1-cB 60 58 0.3934 0.4000 0.4138 1.20e-05 1gmj-a1-m1-cB_1gmj-a1-m1-cA
7 6j5k-a1-m1-cCJ 75 56 0.3770 0.3067 0.4107 2.63e-05 6j5k-a1-m1-cCJ_6j5k-a1-m1-cJ
8 1gmj-a2-m1-cD 56 55 0.3443 0.3750 0.3818 0.007 1gmj-a2-m1-cD_1gmj-a2-m1-cC
9 6edi-a1-m1-cB 394 45 0.2295 0.0355 0.3111 7.4 6edi-a1-m1-cA_6edi-a1-m1-cB
10 6edi-a1-m1-cA 394 45 0.2295 0.0355 0.3111 7.4 6edi-a1-m1-cA_6edi-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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