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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
GGAFGKREQAEEERYFRARAKEQLAALKKHKENEISHHAKEIERLQKEIERHKQSIKKLK
QSEDD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1gmj-a1-m1-cA 65 65 1.0000 1.0000 1.0000 1.80e-39 1gmj-a1-m1-cB_1gmj-a1-m1-cA
2 1gmj-a1-m1-cB 60 60 0.9231 1.0000 1.0000 4.31e-35 1gmj-a1-m1-cB_1gmj-a1-m1-cA
3 1gmj-a2-m1-cC 59 59 0.9077 1.0000 1.0000 2.16e-34 1gmj-a2-m1-cD_1gmj-a2-m1-cC
4 6j5k-a1-m1-cJ 78 60 0.8462 0.7051 0.9167 8.15e-33 6j5k-a1-m1-cCJ_6j5k-a1-m1-cJ
5 1gmj-a2-m1-cD 56 56 0.8615 1.0000 1.0000 1.26e-31 1gmj-a2-m1-cD_1gmj-a2-m1-cC
6 6j5k-a1-m1-cCJ 75 57 0.8000 0.6933 0.9123 5.31e-31 6j5k-a1-m1-cCJ_6j5k-a1-m1-cJ
7 1hf9-a1-m1-cB 41 40 0.6000 0.9512 0.9750 1.15e-19 1hf9-a1-m1-cA_1hf9-a1-m1-cB
8 1hf9-a1-m1-cA 41 40 0.6000 0.9512 0.9750 1.15e-19 1hf9-a1-m1-cA_1hf9-a1-m1-cB
9 7dtl-a1-m1-cB 61 59 0.3846 0.4098 0.4237 1.08e-06 7dtl-a1-m1-cA_7dtl-a1-m1-cB
10 7dtl-a1-m1-cA 61 59 0.3846 0.4098 0.4237 1.08e-06 7dtl-a1-m1-cA_7dtl-a1-m1-cB
11 2iak-a3-m3-cA 198 46 0.2308 0.0758 0.3261 0.47 2iak-a3-m2-cA_2iak-a3-m3-cA
12 2iak-a3-m2-cA 198 46 0.2308 0.0758 0.3261 0.47 2iak-a3-m2-cA_2iak-a3-m3-cA
13 2iak-a2-m6-cA 198 46 0.2308 0.0758 0.3261 0.47 2iak-a2-m2-cA_2iak-a2-m6-cA
14 2iak-a2-m2-cA 198 46 0.2308 0.0758 0.3261 0.47 2iak-a2-m2-cA_2iak-a2-m6-cA
15 6mgw-a1-m1-cB 634 40 0.1692 0.0174 0.2750 2.8 6mgw-a1-m1-cA_6mgw-a1-m1-cB
16 6mgw-a1-m1-cA 634 40 0.1692 0.0174 0.2750 2.8 6mgw-a1-m1-cA_6mgw-a1-m1-cB
17 1t3j-a1-m2-cA 62 30 0.2000 0.2097 0.4333 3.1 1t3j-a1-m1-cA_1t3j-a1-m2-cA
18 1t3j-a1-m1-cA 62 30 0.2000 0.2097 0.4333 3.1 1t3j-a1-m1-cA_1t3j-a1-m2-cA
19 3jbh-a1-m8-cH 964 32 0.2000 0.0135 0.4062 6.2 3jbh-a1-m8-cG_3jbh-a1-m8-cH
20 1z68-a1-m1-cB 719 36 0.2000 0.0181 0.3611 7.1 1z68-a1-m1-cA_1z68-a1-m1-cB
21 1z68-a1-m1-cA 719 36 0.2000 0.0181 0.3611 7.1 1z68-a1-m1-cA_1z68-a1-m1-cB
22 6ijz-a1-m1-cB 683 24 0.1077 0.0102 0.2917 9.2 6ijz-a1-m1-cA_6ijz-a1-m1-cB
23 6ijz-a1-m1-cA 683 24 0.1077 0.0102 0.2917 9.2 6ijz-a1-m1-cA_6ijz-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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