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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
GGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGV
AYVVQEPGDYEVSVKFNEEHIPDSPFVVPVASPS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2w0p-a1-m1-cB 94 94 1.0000 1.0000 1.0000 5.28e-63 2w0p-a1-m1-cA_2w0p-a1-m1-cB
2 2w0p-a1-m1-cA 93 93 0.9894 1.0000 1.0000 2.84e-62 2w0p-a1-m1-cA_2w0p-a1-m1-cB
3 2jf1-a1-m3-cA 87 92 0.9255 1.0000 0.9457 5.44e-55 2jf1-a1-m2-cA_2jf1-a1-m3-cA
4 2jf1-a1-m2-cA 87 92 0.9255 1.0000 0.9457 5.44e-55 2jf1-a1-m2-cA_2jf1-a1-m3-cA
5 7vzo-a1-m1-cB 191 91 0.6915 0.3403 0.7143 2.90e-44 7vzo-a1-m1-cA_7vzo-a1-m1-cB
6 7vzo-a1-m1-cB 191 37 0.2021 0.0995 0.5135 4.92e-04 7vzo-a1-m1-cA_7vzo-a1-m1-cB
7 7vzo-a1-m1-cA 191 91 0.6915 0.3403 0.7143 2.90e-44 7vzo-a1-m1-cA_7vzo-a1-m1-cB
8 7vzo-a1-m1-cA 191 37 0.2021 0.0995 0.5135 4.92e-04 7vzo-a1-m1-cA_7vzo-a1-m1-cB
9 7ouu-a1-m1-cA 202 92 0.4043 0.1881 0.4130 5.18e-12 7ouu-a1-m1-cA_7ouu-a1-m1-cB
10 7ouu-a1-m1-cA 202 90 0.3191 0.1485 0.3333 5.44e-09 7ouu-a1-m1-cA_7ouu-a1-m1-cB
11 7ouu-a1-m1-cB 204 92 0.4043 0.1863 0.4130 5.48e-12 7ouu-a1-m1-cA_7ouu-a1-m1-cB
12 7ouu-a1-m1-cB 204 90 0.3191 0.1471 0.3333 5.54e-09 7ouu-a1-m1-cA_7ouu-a1-m1-cB
13 7ouv-a1-m1-cA 204 92 0.3936 0.1814 0.4022 3.38e-11 7ouv-a1-m1-cB_7ouv-a1-m1-cA
14 7ouv-a1-m1-cA 204 90 0.3191 0.1471 0.3333 5.37e-09 7ouv-a1-m1-cB_7ouv-a1-m1-cA
15 7ouv-a1-m1-cB 202 92 0.3936 0.1832 0.4022 3.55e-11 7ouv-a1-m1-cB_7ouv-a1-m1-cA
16 7ouv-a1-m1-cB 202 90 0.3191 0.1485 0.3333 5.85e-09 7ouv-a1-m1-cB_7ouv-a1-m1-cA
17 1v05-a1-m2-cA 96 90 0.3404 0.3333 0.3556 4.06e-11 1v05-a1-m1-cA_1v05-a1-m2-cA
18 1v05-a1-m1-cA 96 90 0.3404 0.3333 0.3556 4.06e-11 1v05-a1-m1-cA_1v05-a1-m2-cA
19 3cnk-a1-m1-cB 89 88 0.3298 0.3483 0.3523 1.94e-10 3cnk-a1-m1-cA_3cnk-a1-m1-cB
20 3cnk-a1-m1-cA 89 88 0.3298 0.3483 0.3523 1.94e-10 3cnk-a1-m1-cA_3cnk-a1-m1-cB
21 1qfh-a1-m1-cB 212 90 0.2872 0.1274 0.3000 0.002 1qfh-a1-m1-cA_1qfh-a1-m1-cB
22 1qfh-a1-m1-cB 212 67 0.2128 0.0943 0.2985 0.004 1qfh-a1-m1-cA_1qfh-a1-m1-cB
23 1qfh-a1-m1-cA 212 90 0.2872 0.1274 0.3000 0.002 1qfh-a1-m1-cA_1qfh-a1-m1-cB
24 1qfh-a1-m1-cA 212 67 0.2128 0.0943 0.2985 0.004 1qfh-a1-m1-cA_1qfh-a1-m1-cB
25 5xxz-a1-m1-cA 1309 55 0.1915 0.0138 0.3273 4.2 5xxz-a1-m1-cB_5xxz-a1-m1-cA
26 5xxz-a1-m1-cB 1285 55 0.1915 0.0140 0.3273 4.2 5xxz-a1-m1-cB_5xxz-a1-m1-cA
27 2exh-a2-m2-cC 533 32 0.1277 0.0225 0.3750 4.7 2exh-a2-m2-cB_2exh-a2-m2-cC
28 2exh-a2-m2-cB 533 32 0.1277 0.0225 0.3750 4.7 2exh-a2-m1-cA_2exh-a2-m2-cB, 2exh-a2-m2-cB_2exh-a2-m2-cC
29 2exh-a2-m1-cA 533 32 0.1277 0.0225 0.3750 4.7 2exh-a2-m1-cA_2exh-a2-m2-cB
30 2exh-a1-m1-cD 533 32 0.1277 0.0225 0.3750 4.7 2exh-a1-m1-cB_2exh-a1-m1-cD
31 2exh-a1-m1-cB 533 32 0.1277 0.0225 0.3750 4.7 2exh-a1-m1-cB_2exh-a1-m1-cD
32 4ijx-a3-m2-cB 143 53 0.2128 0.1399 0.3774 8.8 4ijx-a3-m2-cB_4ijx-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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