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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
GGDWQEKRKEAFQLAKEGGIAVALSMLNDGLVSAVEPRDKFYWRLLSADLLRANHLDAMA
GEQYQTLLNQVTTLSVPEWEPSLVEQIQRYT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6riu-a1-m1-cB 91 91 1.0000 1.0000 1.0000 6.63e-64 6riu-a1-m1-cA_6riu-a1-m1-cB
2 6riu-a1-m1-cA 91 91 1.0000 1.0000 1.0000 6.63e-64 6riu-a1-m1-cA_6riu-a1-m1-cB
3 3k85-a2-m2-cB 297 40 0.1758 0.0539 0.4000 0.32 3k85-a2-m1-cB_3k85-a2-m2-cB, 3k85-a2-m2-cA_3k85-a2-m2-cB
4 3k85-a2-m2-cA 297 40 0.1758 0.0539 0.4000 0.32 3k85-a2-m2-cA_3k85-a2-m2-cB
5 3k85-a2-m1-cB 297 40 0.1758 0.0539 0.4000 0.32 3k85-a2-m1-cB_3k85-a2-m2-cB
6 4ejm-a1-m4-cA 339 40 0.1648 0.0442 0.3750 1.1 4ejm-a1-m1-cA_4ejm-a1-m4-cA, 4ejm-a1-m2-cA_4ejm-a1-m4-cA, 4ejm-a1-m3-cA_4ejm-a1-m4-cA
7 4ejm-a1-m3-cA 339 40 0.1648 0.0442 0.3750 1.1 4ejm-a1-m3-cA_4ejm-a1-m4-cA
8 4ejm-a1-m2-cA 339 40 0.1648 0.0442 0.3750 1.1 4ejm-a1-m2-cA_4ejm-a1-m4-cA
9 4ejm-a1-m1-cA 339 40 0.1648 0.0442 0.3750 1.1 4ejm-a1-m1-cA_4ejm-a1-m4-cA
10 3rt6-a1-m2-cB 258 67 0.1978 0.0698 0.2687 6.9 3rt6-a1-m1-cB_3rt6-a1-m2-cB
11 3rt6-a1-m1-cB 258 67 0.1978 0.0698 0.2687 6.9 3rt6-a1-m1-cB_3rt6-a1-m2-cB
12 2x6h-a1-m1-cB 543 35 0.1538 0.0258 0.4000 7.9 2x6h-a1-m1-cA_2x6h-a1-m1-cB
13 2x6h-a1-m1-cA 543 35 0.1538 0.0258 0.4000 7.9 2x6h-a1-m1-cA_2x6h-a1-m1-cB
14 4i6v-a1-m1-cC 419 32 0.0879 0.0191 0.2500 9.3 4i6v-a1-m1-cA_4i6v-a1-m1-cC
15 4i6v-a1-m1-cA 419 32 0.0879 0.0191 0.2500 9.3 4i6v-a1-m1-cA_4i6v-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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