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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
GGGIDYILLGEIATENQFEVTYVDIEETFSGQFQCLVQLSTLPVGVCHGSGPTAADAQRH
AAQNALEYLIMT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4x8w-a1-m1-cE 72 72 1.0000 1.0000 1.0000 5.88e-49 4x8w-a1-m1-cA_4x8w-a1-m1-cE, 4x8w-a1-m1-cB_4x8w-a1-m1-cE, 4x8w-a1-m1-cD_4x8w-a1-m1-cE
2 4x8w-a1-m1-cD 70 70 0.9722 1.0000 1.0000 1.83e-47 4x8w-a1-m1-cD_4x8w-a1-m1-cE
3 4x8w-a1-m1-cA 69 69 0.9583 1.0000 1.0000 9.24e-47 4x8w-a1-m1-cA_4x8w-a1-m1-cE
4 4x8w-a1-m1-cB 69 69 0.9583 1.0000 1.0000 1.11e-46 4x8w-a1-m1-cB_4x8w-a1-m1-cE
5 4dkk-a1-m2-cA 104 52 0.2222 0.1538 0.3077 0.56 4dkk-a1-m1-cA_4dkk-a1-m2-cA
6 4dkk-a1-m1-cA 104 52 0.2222 0.1538 0.3077 0.56 4dkk-a1-m1-cA_4dkk-a1-m2-cA
7 6zm9-a1-m3-cA 129 31 0.1528 0.0853 0.3548 5.4 6zm9-a1-m2-cA_6zm9-a1-m3-cA
8 6zm9-a1-m2-cA 129 31 0.1528 0.0853 0.3548 5.4 6zm9-a1-m2-cA_6zm9-a1-m3-cA
9 6nim-a1-m1-cB 113 35 0.2222 0.1416 0.4571 5.8 6nim-a1-m1-cA_6nim-a1-m1-cB
10 6nim-a1-m1-cA 113 35 0.2222 0.1416 0.4571 5.8 6nim-a1-m1-cA_6nim-a1-m1-cB
11 3k5x-a2-m2-cA 391 59 0.2222 0.0409 0.2712 8.8 3k5x-a2-m1-cA_3k5x-a2-m2-cA
12 3k5x-a2-m1-cA 391 59 0.2222 0.0409 0.2712 8.8 3k5x-a2-m1-cA_3k5x-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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