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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=35)
GGIFSAEFLKVFLPSLLLSHLLAIGLGIYIGRRLT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2j5d-a1-m1-cB 45 35 1.0000 0.7778 1.0000 4.82e-18 2j5d-a1-m1-cA_2j5d-a1-m1-cB
2 2j5d-a1-m1-cA 45 35 1.0000 0.7778 1.0000 4.82e-18 2j5d-a1-m1-cA_2j5d-a1-m1-cB
3 2ka2-a1-m1-cB 35 35 1.0000 1.0000 1.0000 1.28e-17 2ka2-a1-m1-cA_2ka2-a1-m1-cB
4 2ka2-a1-m1-cA 35 35 1.0000 1.0000 1.0000 1.28e-17 2ka2-a1-m1-cA_2ka2-a1-m1-cB
5 2ka1-a1-m1-cB 35 35 1.0000 1.0000 1.0000 1.28e-17 2ka1-a1-m1-cA_2ka1-a1-m1-cB
6 2ka1-a1-m1-cA 35 35 1.0000 1.0000 1.0000 1.28e-17 2ka1-a1-m1-cA_2ka1-a1-m1-cB
7 3ibs-a1-m1-cB 199 29 0.3429 0.0603 0.4138 8.5 3ibs-a1-m1-cB_3ibs-a1-m2-cA
8 3ibs-a1-m2-cA 200 29 0.3429 0.0600 0.4138 8.5 3ibs-a1-m1-cB_3ibs-a1-m2-cA
9 5l1m-a1-m2-cA 140 24 0.3143 0.0786 0.4583 9.7 5l1m-a1-m1-cA_5l1m-a1-m2-cA
10 5l1m-a1-m1-cA 140 24 0.3143 0.0786 0.4583 9.7 5l1m-a1-m1-cA_5l1m-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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