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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
GGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPASLGQ
LPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFDL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ew5-a1-m1-cA 101 96 1.0000 0.9505 1.0000 8.64e-65 4ew5-a1-m1-cB_4ew5-a1-m1-cA
2 4ew5-a1-m1-cB 96 96 1.0000 1.0000 1.0000 9.30e-65 4ew5-a1-m1-cB_4ew5-a1-m1-cA
3 5y0e-a1-m1-cC 425 23 0.1042 0.0235 0.4348 0.38 5y0e-a1-m1-cC_5y0e-a1-m1-cA, 5y0e-a1-m1-cC_5y0e-a1-m1-cB
4 5y0e-a1-m1-cB 440 23 0.1042 0.0227 0.4348 0.42 5y0e-a1-m1-cB_5y0e-a1-m1-cA, 5y0e-a1-m1-cC_5y0e-a1-m1-cB
5 5y0e-a1-m1-cA 442 23 0.1042 0.0226 0.4348 0.42 5y0e-a1-m1-cB_5y0e-a1-m1-cA, 5y0e-a1-m1-cC_5y0e-a1-m1-cA
6 7qd8-a1-m1-cB 865 33 0.1250 0.0139 0.3636 2.2 7qd8-a1-m1-cA_7qd8-a1-m1-cB
7 7qd8-a1-m1-cA 865 33 0.1250 0.0139 0.3636 2.2 7qd8-a1-m1-cA_7qd8-a1-m1-cB
8 7qd6-a1-m1-cD 908 33 0.1250 0.0132 0.3636 2.2 7qd6-a1-m1-cA_7qd6-a1-m1-cD
9 7qd6-a1-m1-cA 908 33 0.1250 0.0132 0.3636 2.2 7qd6-a1-m1-cA_7qd6-a1-m1-cD
10 2dq3-a1-m1-cB 422 42 0.1458 0.0332 0.3333 5.4 2dq3-a1-m1-cA_2dq3-a1-m1-cB
11 2dq3-a1-m1-cA 422 42 0.1458 0.0332 0.3333 5.4 2dq3-a1-m1-cA_2dq3-a1-m1-cB
12 2y2j-a1-m2-cA 470 53 0.1562 0.0319 0.2830 7.4 2y2j-a1-m1-cA_2y2j-a1-m2-cA
13 2y2j-a1-m1-cA 470 53 0.1562 0.0319 0.2830 7.4 2y2j-a1-m1-cA_2y2j-a1-m2-cA
14 2y2o-a1-m2-cA 471 53 0.1562 0.0318 0.2830 7.4 2y2o-a1-m1-cA_2y2o-a1-m2-cA
15 2y2o-a1-m1-cA 471 53 0.1562 0.0318 0.2830 7.4 2y2o-a1-m1-cA_2y2o-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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