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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=37)
GGREGVLKKLRAVENELHYNKSLLEEVKDELQKMRQL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1c94-a2-m2-cB 37 37 1.0000 1.0000 1.0000 8.35e-20 1c94-a2-m2-cA_1c94-a2-m2-cB
2 1c94-a2-m2-cA 37 37 1.0000 1.0000 1.0000 8.35e-20 1c94-a2-m2-cA_1c94-a2-m2-cB
3 1wvl-a1-m2-cB 80 16 0.3784 0.1750 0.8750 0.004 1wvl-a1-m1-cA_1wvl-a1-m2-cB, 1wvl-a1-m1-cB_1wvl-a1-m2-cB, 1wvl-a1-m2-cA_1wvl-a1-m2-cB
4 1wvl-a1-m2-cA 80 16 0.3784 0.1750 0.8750 0.004 1wvl-a1-m2-cA_1wvl-a1-m2-cB
5 1wvl-a1-m1-cB 80 16 0.3784 0.1750 0.8750 0.004 1wvl-a1-m1-cB_1wvl-a1-m2-cB
6 1wvl-a1-m1-cA 80 16 0.3784 0.1750 0.8750 0.004 1wvl-a1-m1-cA_1wvl-a1-m2-cB
7 7wiy-a1-m1-cD 340 31 0.3514 0.0382 0.4194 1.2 7wiy-a1-m1-cA_7wiy-a1-m1-cD, 7wiy-a1-m1-cC_7wiy-a1-m1-cD
8 7wiy-a1-m1-cC 340 31 0.3514 0.0382 0.4194 1.2 7wiy-a1-m1-cC_7wiy-a1-m1-cD
9 7wiy-a1-m1-cA 340 31 0.3514 0.0382 0.4194 1.2 7wiy-a1-m1-cA_7wiy-a1-m1-cD
10 4cz9-a1-m2-cA 419 19 0.2703 0.0239 0.5263 1.4 4cz9-a1-m2-cA_4cz9-a1-m2-cB
11 4cz9-a1-m1-cA 419 19 0.2703 0.0239 0.5263 1.4 4cz9-a1-m1-cA_4cz9-a1-m2-cB
12 4cz9-a1-m2-cB 420 19 0.2703 0.0238 0.5263 1.4 4cz9-a1-m1-cA_4cz9-a1-m2-cB, 4cz9-a1-m2-cA_4cz9-a1-m2-cB
13 6ryd-a2-m1-cF 58 19 0.1892 0.1207 0.3684 7.7 6ryd-a2-m1-cF_6ryd-a2-m1-cE
14 6ryd-a2-m1-cE 68 19 0.1892 0.1029 0.3684 8.1 6ryd-a2-m1-cF_6ryd-a2-m1-cE
15 6ryl-a2-m1-cD 63 19 0.1892 0.1111 0.3684 8.4 6ryl-a2-m1-cD_6ryl-a2-m1-cE
16 6ryl-a2-m1-cE 64 19 0.1892 0.1094 0.3684 8.4 6ryl-a2-m1-cD_6ryl-a2-m1-cE

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Reference:
Jacob Schwartz et al.

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