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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
GGTDRMARLLGELLVSTDDSGNLAVLRTPPGAAHYLASAIDRAALPQVVGTIAGDDTILV
VAREPTTGAQLAGMFENLR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3cag-a2-m1-cC 79 79 1.0000 1.0000 1.0000 1.79e-51 3cag-a2-m1-cB_3cag-a2-m1-cC
2 3cag-a2-m1-cB 79 79 1.0000 1.0000 1.0000 1.79e-51 3cag-a2-m1-cB_3cag-a2-m1-cC
3 3lap-a1-m1-cB 149 79 1.0000 0.5302 1.0000 2.14e-51 3lap-a1-m1-cB_3lap-a1-m1-cF
4 3lap-a1-m1-cA 149 79 1.0000 0.5302 1.0000 2.14e-51 3lap-a1-m1-cA_3lap-a1-m1-cF
5 3fhz-a1-m1-cF 155 79 1.0000 0.5097 1.0000 3.43e-51 3fhz-a1-m1-cF_3fhz-a1-m1-cB
6 3fhz-a1-m1-cE 155 79 1.0000 0.5097 1.0000 3.43e-51 3fhz-a1-m1-cE_3fhz-a1-m1-cB, 3fhz-a1-m1-cE_3fhz-a1-m1-cD
7 3fhz-a1-m1-cA 155 79 1.0000 0.5097 1.0000 3.43e-51 3fhz-a1-m1-cA_3fhz-a1-m1-cB
8 3ere-a1-m2-cD 156 79 1.0000 0.5064 1.0000 3.91e-51 3ere-a1-m1-cD_3ere-a1-m2-cD
9 3ere-a1-m1-cD 156 79 1.0000 0.5064 1.0000 3.91e-51 3ere-a1-m1-cD_3ere-a1-m2-cD
10 3lap-a1-m1-cF 154 79 1.0000 0.5130 1.0000 4.24e-51 3lap-a1-m1-cA_3lap-a1-m1-cF, 3lap-a1-m1-cB_3lap-a1-m1-cF, 3lap-a1-m1-cE_3lap-a1-m1-cF
11 3lap-a1-m1-cE 154 79 1.0000 0.5130 1.0000 4.24e-51 3lap-a1-m1-cE_3lap-a1-m1-cF
12 3fhz-a1-m1-cB 161 79 1.0000 0.4907 1.0000 4.87e-51 3fhz-a1-m1-cA_3fhz-a1-m1-cB, 3fhz-a1-m1-cE_3fhz-a1-m1-cB, 3fhz-a1-m1-cF_3fhz-a1-m1-cB
13 3fhz-a1-m1-cD 166 79 1.0000 0.4759 1.0000 5.68e-51 3fhz-a1-m1-cE_3fhz-a1-m1-cD
14 3bue-a1-m1-cF 78 78 0.9873 1.0000 1.0000 8.72e-51 3bue-a1-m1-cA_3bue-a1-m1-cF
15 3bue-a1-m1-cA 78 78 0.9873 1.0000 1.0000 8.72e-51 3bue-a1-m1-cA_3bue-a1-m1-cF
16 5cj9-a1-m3-cA 146 74 0.3418 0.1849 0.3649 3.91e-12 5cj9-a1-m2-cA_5cj9-a1-m3-cA
17 5cj9-a1-m2-cA 146 74 0.3418 0.1849 0.3649 3.91e-12 5cj9-a1-m2-cA_5cj9-a1-m3-cA
18 3v4g-a1-m6-cA 145 63 0.2911 0.1586 0.3651 2.12e-05 3v4g-a1-m2-cA_3v4g-a1-m6-cA, 3v4g-a1-m5-cA_3v4g-a1-m6-cA
19 3v4g-a1-m5-cA 145 63 0.2911 0.1586 0.3651 2.12e-05 3v4g-a1-m5-cA_3v4g-a1-m6-cA
20 3v4g-a1-m2-cA 145 63 0.2911 0.1586 0.3651 2.12e-05 3v4g-a1-m2-cA_3v4g-a1-m6-cA
21 1xxb-a1-m1-cF 71 68 0.2911 0.3239 0.3382 5.32e-05 1xxb-a1-m1-cE_1xxb-a1-m1-cF
22 1xxb-a1-m1-cE 71 68 0.2911 0.3239 0.3382 5.32e-05 1xxb-a1-m1-cE_1xxb-a1-m1-cF
23 1xxb-a1-m1-cD 71 68 0.2911 0.3239 0.3382 5.32e-05 1xxb-a1-m1-cA_1xxb-a1-m1-cD
24 1xxb-a1-m1-cA 71 68 0.2911 0.3239 0.3382 5.32e-05 1xxb-a1-m1-cA_1xxb-a1-m1-cD
25 4u7n-a1-m1-cA 211 65 0.2532 0.0948 0.3077 2.1 4u7n-a1-m1-cA_4u7n-a1-m1-cB
26 4u7n-a1-m1-cB 212 65 0.2532 0.0943 0.3077 2.2 4u7n-a1-m1-cA_4u7n-a1-m1-cB
27 4bwi-a1-m1-cB 377 20 0.1266 0.0265 0.5000 2.5 4bwi-a1-m1-cB_4bwi-a1-m1-cA
28 4bwi-a1-m1-cA 381 20 0.1266 0.0262 0.5000 2.5 4bwi-a1-m1-cB_4bwi-a1-m1-cA
29 2pff-a1-m2-cH 2006 58 0.2405 0.0095 0.3276 3.9 2pff-a1-m2-cE_2pff-a1-m2-cH
30 2pff-a1-m2-cE 2006 58 0.2405 0.0095 0.3276 3.9 2pff-a1-m2-cE_2pff-a1-m2-cH
31 4nq3-a1-m2-cB 334 78 0.3418 0.0808 0.3462 6.5 4nq3-a1-m1-cB_4nq3-a1-m2-cB, 4nq3-a1-m2-cB_4nq3-a1-m1-cA, 4nq3-a1-m2-cB_4nq3-a1-m2-cA
32 4nq3-a1-m1-cB 334 78 0.3418 0.0808 0.3462 6.5 4nq3-a1-m1-cB_4nq3-a1-m2-cB
33 4nq3-a1-m2-cA 337 78 0.3418 0.0801 0.3462 6.5 4nq3-a1-m2-cB_4nq3-a1-m2-cA
34 4nq3-a1-m1-cA 337 78 0.3418 0.0801 0.3462 6.5 4nq3-a1-m2-cB_4nq3-a1-m1-cA
35 1dqu-a1-m4-cA 513 57 0.2025 0.0312 0.2807 6.9 1dqu-a1-m1-cA_1dqu-a1-m4-cA, 1dqu-a1-m2-cA_1dqu-a1-m4-cA, 1dqu-a1-m3-cA_1dqu-a1-m4-cA
36 1dqu-a1-m3-cA 513 57 0.2025 0.0312 0.2807 6.9 1dqu-a1-m3-cA_1dqu-a1-m4-cA
37 1dqu-a1-m2-cA 513 57 0.2025 0.0312 0.2807 6.9 1dqu-a1-m2-cA_1dqu-a1-m4-cA
38 1dqu-a1-m1-cA 513 57 0.2025 0.0312 0.2807 6.9 1dqu-a1-m1-cA_1dqu-a1-m4-cA

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Reference:
Jacob Schwartz et al.

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