Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=60)
GGVTTFVALYDYVASGETDLSFKKGERLQIVNNTEGDWWLAHSLTTGQTGYIPSNYVAPS

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 7pvz-a1-m1-cB 60 60 1.0000 1.0000 1.0000 6.17e-40 7pvz-a1-m1-cA_7pvz-a1-m1-cB
2 7pvz-a1-m1-cA 60 60 1.0000 1.0000 1.0000 6.17e-40 7pvz-a1-m1-cA_7pvz-a1-m1-cB
3 4le9-a1-m2-cA 59 56 0.8500 0.8644 0.9107 7.40e-33 4le9-a1-m1-cA_4le9-a1-m2-cA
4 4le9-a1-m1-cA 59 56 0.8500 0.8644 0.9107 7.40e-33 4le9-a1-m1-cA_4le9-a1-m2-cA
5 2hda-a3-m3-cA 59 59 0.7333 0.7458 0.7458 1.19e-28 2hda-a3-m2-cA_2hda-a3-m3-cA
6 2hda-a3-m2-cA 59 59 0.7333 0.7458 0.7458 1.19e-28 2hda-a3-m2-cA_2hda-a3-m3-cA
7 2hda-a2-m6-cA 59 59 0.7333 0.7458 0.7458 1.19e-28 2hda-a2-m2-cA_2hda-a2-m6-cA
8 2hda-a2-m2-cA 59 59 0.7333 0.7458 0.7458 1.19e-28 2hda-a2-m2-cA_2hda-a2-m6-cA
9 1shf-a1-m2-cB 59 57 0.7167 0.7288 0.7544 3.44e-27 1shf-a1-m2-cA_1shf-a1-m2-cB
10 1shf-a1-m2-cA 59 57 0.7167 0.7288 0.7544 3.44e-27 1shf-a1-m2-cA_1shf-a1-m2-cB
11 1bu1-a1-m1-cE 57 52 0.4833 0.5088 0.5577 6.84e-15 1bu1-a1-m1-cC_1bu1-a1-m1-cE
12 1bu1-a1-m1-cC 56 52 0.4833 0.5179 0.5577 6.90e-15 1bu1-a1-m1-cC_1bu1-a1-m1-cE
13 2iim-a1-m2-cA 62 52 0.4667 0.4516 0.5385 1.30e-14 2iim-a1-m1-cA_2iim-a1-m2-cA
14 2iim-a1-m1-cA 62 52 0.4667 0.4516 0.5385 1.30e-14 2iim-a1-m1-cA_2iim-a1-m2-cA
15 4u5w-a1-m1-cB 163 52 0.4833 0.1779 0.5577 7.37e-14 4u5w-a1-m1-cD_4u5w-a1-m1-cB
16 4u5w-a1-m1-cD 160 52 0.4833 0.1812 0.5577 7.44e-14 4u5w-a1-m1-cD_4u5w-a1-m1-cB
17 1x27-a1-m1-cF 163 52 0.4667 0.1718 0.5385 1.08e-13 1x27-a1-m1-cA_1x27-a1-m1-cF, 1x27-a1-m1-cD_1x27-a1-m1-cF
18 1x27-a1-m1-cD 163 52 0.4667 0.1718 0.5385 1.08e-13 1x27-a1-m1-cD_1x27-a1-m1-cF
19 1x27-a1-m1-cA 163 52 0.4667 0.1718 0.5385 1.08e-13 1x27-a1-m1-cA_1x27-a1-m1-cF
20 2hck-a1-m1-cB 437 52 0.4833 0.0664 0.5577 2.49e-13 2hck-a1-m1-cA_2hck-a1-m1-cB
21 2hck-a1-m1-cA 437 52 0.4833 0.0664 0.5577 2.49e-13 2hck-a1-m1-cA_2hck-a1-m1-cB
22 1abq-a1-m2-cA 56 55 0.4333 0.4643 0.4727 1.72e-11 1abq-a1-m1-cA_1abq-a1-m2-cA
23 1abq-a1-m1-cA 56 55 0.4333 0.4643 0.4727 1.72e-11 1abq-a1-m1-cA_1abq-a1-m2-cA
24 3eg1-a1-m1-cA 58 55 0.4333 0.4483 0.4727 1.18e-10 3eg1-a1-m1-cB_3eg1-a1-m1-cA
25 3eg1-a1-m1-cB 56 55 0.4167 0.4464 0.4545 1.26e-10 3eg1-a1-m1-cB_3eg1-a1-m1-cA
26 1opl-a3-m2-cA 451 55 0.4667 0.0621 0.5091 3.98e-10 1opl-a3-m1-cA_1opl-a3-m2-cA
27 1opl-a3-m1-cA 451 55 0.4667 0.0621 0.5091 3.98e-10 1opl-a3-m1-cA_1opl-a3-m2-cA
28 4xi2-a1-m2-cA 421 51 0.4000 0.0570 0.4706 2.46e-09 4xi2-a1-m1-cA_4xi2-a1-m2-cA
29 4xi2-a1-m1-cA 421 51 0.4000 0.0570 0.4706 2.46e-09 4xi2-a1-m1-cA_4xi2-a1-m2-cA
30 1z9z-a5-m5-cB 60 59 0.2500 0.2500 0.2542 2.97e-09 1z9z-a5-m1-cB_1z9z-a5-m5-cB
31 1z9z-a5-m1-cB 60 59 0.2500 0.2500 0.2542 2.97e-09 1z9z-a5-m1-cB_1z9z-a5-m5-cB
32 1z9z-a4-m4-cB 60 59 0.2500 0.2500 0.2542 2.97e-09 1z9z-a4-m1-cA_1z9z-a4-m4-cB
33 1z9z-a4-m1-cA 60 59 0.2500 0.2500 0.2542 2.97e-09 1z9z-a4-m1-cA_1z9z-a4-m4-cB
34 6a9c-a1-m1-cA 59 50 0.3833 0.3898 0.4600 1.03e-07 6a9c-a1-m1-cA_6a9c-a1-m1-cB
35 6a9c-a1-m1-cB 66 50 0.3833 0.3485 0.4600 1.21e-07 6a9c-a1-m1-cA_6a9c-a1-m1-cB
36 6aqb-a1-m2-cB 70 59 0.3667 0.3143 0.3729 1.88e-07 6aqb-a1-m1-cA_6aqb-a1-m2-cB
37 6aqb-a1-m1-cA 70 59 0.3667 0.3143 0.3729 1.88e-07 6aqb-a1-m1-cA_6aqb-a1-m2-cB
38 6cq7-a2-m2-cA 73 59 0.3667 0.3014 0.3729 1.96e-07 6cq7-a2-m1-cA_6cq7-a2-m2-cA
39 6cq7-a2-m1-cA 73 59 0.3667 0.3014 0.3729 1.96e-07 6cq7-a2-m1-cA_6cq7-a2-m2-cA
40 5k26-a1-m1-cB 75 59 0.3667 0.2933 0.3729 2.04e-07 5k26-a1-m1-cB_5k26-a1-m1-cA
41 2d0n-a1-m1-cC 56 52 0.3167 0.3393 0.3654 2.05e-07 2d0n-a1-m1-cC_2d0n-a1-m1-cA
42 5k26-a1-m1-cA 77 59 0.3667 0.2857 0.3729 2.13e-07 5k26-a1-m1-cB_5k26-a1-m1-cA
43 2d0n-a1-m1-cA 59 52 0.3167 0.3220 0.3654 2.21e-07 2d0n-a1-m1-cC_2d0n-a1-m1-cA
44 2sem-a1-m1-cA 58 57 0.3333 0.3448 0.3509 2.88e-07 2sem-a1-m1-cA_2sem-a1-m1-cB
45 2sem-a1-m1-cB 59 57 0.3333 0.3390 0.3509 2.94e-07 2sem-a1-m1-cA_2sem-a1-m1-cB
46 5sxp-a2-m1-cB 61 50 0.3167 0.3115 0.3800 7.61e-07 5sxp-a2-m1-cD_5sxp-a2-m1-cB
47 2p4r-a2-m2-cA 55 50 0.3167 0.3455 0.3800 8.15e-07 2p4r-a2-m1-cA_2p4r-a2-m2-cA
48 2p4r-a2-m1-cA 55 50 0.3167 0.3455 0.3800 8.15e-07 2p4r-a2-m1-cA_2p4r-a2-m2-cA
49 5sxp-a2-m1-cD 60 50 0.3167 0.3167 0.3800 8.31e-07 5sxp-a2-m1-cD_5sxp-a2-m1-cB
50 2esw-a3-m1-cB 57 50 0.3167 0.3333 0.3800 8.59e-07 2esw-a3-m1-cB_2esw-a3-m1-cA
51 2esw-a3-m1-cA 60 50 0.3167 0.3167 0.3800 8.68e-07 2esw-a3-m1-cB_2esw-a3-m1-cA
52 2ak5-a1-m2-cA 60 50 0.3167 0.3167 0.3800 8.68e-07 2ak5-a1-m2-cA_2ak5-a1-m2-cB
53 2ak5-a1-m2-cB 64 50 0.3167 0.2969 0.3800 9.15e-07 2ak5-a1-m2-cA_2ak5-a1-m2-cB
54 2oaw-a5-m4-cD 65 57 0.3500 0.3231 0.3684 1.54e-06 2oaw-a5-m1-cB_2oaw-a5-m4-cD, 2oaw-a5-m3-cC_2oaw-a5-m4-cD
55 2oaw-a5-m3-cC 65 57 0.3500 0.3231 0.3684 1.54e-06 2oaw-a5-m3-cC_2oaw-a5-m4-cD
56 2oaw-a5-m1-cB 65 57 0.3500 0.3231 0.3684 1.54e-06 2oaw-a5-m1-cB_2oaw-a5-m4-cD
57 2d1x-a2-m1-cD 59 53 0.3167 0.3220 0.3585 3.02e-06 2d1x-a2-m1-cD_2d1x-a2-m1-cC
58 2d1x-a2-m1-cC 66 53 0.3167 0.2879 0.3585 3.39e-06 2d1x-a2-m1-cD_2d1x-a2-m1-cC
59 1jqq-a1-m1-cC 70 55 0.3333 0.2857 0.3636 1.11e-05 1jqq-a1-m1-cC_1jqq-a1-m1-cD
60 1jqq-a1-m1-cD 73 56 0.3333 0.2740 0.3571 1.18e-05 1jqq-a1-m1-cC_1jqq-a1-m1-cD, 1jqq-a1-m1-cD_1jqq-a1-m1-cA
61 1jqq-a1-m1-cB 82 56 0.3333 0.2439 0.3571 1.26e-05 1jqq-a1-m1-cA_1jqq-a1-m1-cB
62 1k9a-a7-m2-cD 433 54 0.3500 0.0485 0.3889 1.33e-05 1k9a-a7-m2-cD_1k9a-a7-m1-cC
63 1jqq-a1-m1-cA 79 56 0.3333 0.2532 0.3571 1.34e-05 1jqq-a1-m1-cA_1jqq-a1-m1-cB, 1jqq-a1-m1-cD_1jqq-a1-m1-cA
64 1k9a-a7-m1-cC 438 54 0.3500 0.0479 0.3889 1.51e-05 1k9a-a7-m2-cD_1k9a-a7-m1-cC
65 1zuy-a1-m1-cB 58 55 0.3000 0.3103 0.3273 9.72e-05 1zuy-a1-m1-cA_1zuy-a1-m1-cB
66 1zuy-a1-m1-cA 58 55 0.3000 0.3103 0.3273 9.72e-05 1zuy-a1-m1-cA_1zuy-a1-m1-cB
67 3nmz-a1-m1-cD 84 57 0.2833 0.2024 0.2982 9.88e-05 3nmz-a1-m1-cD_3nmz-a1-m1-cC
68 3nmz-a1-m1-cC 85 57 0.2833 0.2000 0.2982 9.95e-05 3nmz-a1-m1-cD_3nmz-a1-m1-cC
69 1ov3-a2-m2-cB 127 57 0.2167 0.1024 0.2281 2.05e-04 1ov3-a2-m2-cB_1ov3-a2-m2-cA
70 1ov3-a2-m2-cB 127 55 0.2667 0.1260 0.2909 0.038 1ov3-a2-m2-cB_1ov3-a2-m2-cA
71 1wyx-a1-m1-cA 68 53 0.3333 0.2941 0.3774 2.18e-04 1wyx-a1-m1-cA_1wyx-a1-m1-cB
72 1ov3-a2-m2-cA 134 57 0.2167 0.0970 0.2281 2.30e-04 1ov3-a2-m1-cA_1ov3-a2-m2-cA, 1ov3-a2-m2-cB_1ov3-a2-m2-cA
73 1ov3-a2-m2-cA 134 55 0.2667 0.1194 0.2909 0.042 1ov3-a2-m1-cA_1ov3-a2-m2-cA, 1ov3-a2-m2-cB_1ov3-a2-m2-cA
74 1ov3-a2-m1-cA 134 57 0.2167 0.0970 0.2281 2.30e-04 1ov3-a2-m1-cA_1ov3-a2-m2-cA
75 1ov3-a2-m1-cA 134 55 0.2667 0.1194 0.2909 0.042 1ov3-a2-m1-cA_1ov3-a2-m2-cA
76 1i07-a1-m1-cB 59 48 0.2500 0.2542 0.3125 2.62e-04 1i07-a1-m1-cA_1i07-a1-m1-cB
77 1i07-a1-m1-cA 59 48 0.2500 0.2542 0.3125 2.62e-04 1i07-a1-m1-cA_1i07-a1-m1-cB
78 1wyx-a1-m1-cB 69 53 0.3333 0.2899 0.3774 2.62e-04 1wyx-a1-m1-cA_1wyx-a1-m1-cB
79 6gbu-a1-m1-cH 63 52 0.2667 0.2540 0.3077 0.002 6gbu-a1-m1-cH_6gbu-a1-m1-cD
80 6gbu-a1-m1-cD 64 52 0.2667 0.2500 0.3077 0.003 6gbu-a1-m1-cH_6gbu-a1-m1-cD
81 7m4r-a1-m1-cB 270 31 0.2000 0.0444 0.3871 0.008 7m4r-a1-m1-cB_7m4r-a1-m1-cA
82 7m4r-a1-m1-cA 360 31 0.2000 0.0333 0.3871 0.008 7m4r-a1-m1-cB_7m4r-a1-m1-cA
83 4iim-a1-m1-cB 55 50 0.2500 0.2727 0.3000 0.018 4iim-a1-m1-cB_4iim-a1-m1-cA
84 4iim-a1-m1-cA 57 50 0.2500 0.2632 0.3000 0.018 4iim-a1-m1-cB_4iim-a1-m1-cA
85 2xkx-a1-m1-cA 721 56 0.3167 0.0264 0.3393 0.039 2xkx-a1-m1-cB_2xkx-a1-m1-cA
86 2xkx-a1-m1-cB 718 56 0.3167 0.0265 0.3393 0.040 2xkx-a1-m1-cB_2xkx-a1-m1-cA
87 6gbu-a1-m1-cG 54 50 0.2833 0.3148 0.3400 0.100 6gbu-a1-m1-cE_6gbu-a1-m1-cG
88 3ri0-a3-m2-cB 155 44 0.2333 0.0903 0.3182 2.8 3ri0-a3-m1-cB_3ri0-a3-m2-cB, 3ri0-a3-m2-cB_3ri0-a3-m1-cA, 3ri0-a3-m2-cB_3ri0-a3-m2-cA
89 3ri0-a3-m1-cB 155 44 0.2333 0.0903 0.3182 2.8 3ri0-a3-m1-cB_3ri0-a3-m2-cB
90 3ri0-a3-m2-cA 156 44 0.2333 0.0897 0.3182 3.1 3ri0-a3-m2-cB_3ri0-a3-m2-cA
91 3ri0-a3-m1-cA 156 44 0.2333 0.0897 0.3182 3.1 3ri0-a3-m2-cB_3ri0-a3-m1-cA
92 6gbu-a1-m1-cE 42 47 0.2667 0.3810 0.3404 4.0 6gbu-a1-m1-cE_6gbu-a1-m1-cG
93 7q5s-a1-m1-cL 1550 41 0.2333 0.0090 0.3415 8.9 7q5s-a1-m1-cA_7q5s-a1-m1-cL, 7q5s-a1-m1-cD_7q5s-a1-m1-cL, 7q5s-a1-m1-cF_7q5s-a1-m1-cL
94 7q5s-a1-m1-cF 1550 41 0.2333 0.0090 0.3415 8.9 7q5s-a1-m1-cF_7q5s-a1-m1-cL
95 7q5s-a1-m1-cD 1550 41 0.2333 0.0090 0.3415 8.9 7q5s-a1-m1-cD_7q5s-a1-m1-cL
96 7q5s-a1-m1-cA 1550 41 0.2333 0.0090 0.3415 8.9 7q5s-a1-m1-cA_7q5s-a1-m1-cL

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600