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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
GHAELYVSDREGSDATGDGTKEKPFKTGLKALTVGKEPFPTIYVDSQKENERWNVISKSQ
LKNIKKWHREQK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4zya-a1-m1-cB 72 72 1.0000 1.0000 1.0000 2.07e-49 4zya-a1-m1-cA_4zya-a1-m1-cB
2 4zya-a1-m1-cA 65 70 0.9028 1.0000 0.9286 2.65e-41 4zya-a1-m1-cA_4zya-a1-m1-cB
3 3ch5-a2-m2-cA 193 42 0.1806 0.0674 0.3095 1.4 3ch5-a2-m1-cA_3ch5-a2-m2-cA
4 3ch5-a2-m1-cA 193 42 0.1806 0.0674 0.3095 1.4 3ch5-a2-m1-cA_3ch5-a2-m2-cA
5 3ch5-a1-m4-cA 193 42 0.1806 0.0674 0.3095 1.4 3ch5-a1-m1-cA_3ch5-a1-m4-cA, 3ch5-a1-m2-cA_3ch5-a1-m4-cA
6 3ch5-a1-m2-cA 193 42 0.1806 0.0674 0.3095 1.4 3ch5-a1-m2-cA_3ch5-a1-m4-cA
7 3ch5-a1-m1-cA 193 42 0.1806 0.0674 0.3095 1.4 3ch5-a1-m1-cA_3ch5-a1-m4-cA
8 1byu-a1-m1-cB 215 42 0.1806 0.0605 0.3095 1.4 1byu-a1-m1-cA_1byu-a1-m1-cB
9 1rrp-a4-m1-cA 204 42 0.1806 0.0637 0.3095 1.4 1rrp-a4-m2-cC_1rrp-a4-m1-cA
10 1rrp-a3-m2-cA 204 42 0.1806 0.0637 0.3095 1.4 1rrp-a3-m1-cA_1rrp-a3-m2-cA, 1rrp-a3-m2-cC_1rrp-a3-m2-cA
11 1rrp-a3-m1-cA 204 42 0.1806 0.0637 0.3095 1.4 1rrp-a3-m1-cA_1rrp-a3-m2-cA
12 1rrp-a4-m2-cC 180 42 0.1806 0.0722 0.3095 1.7 1rrp-a4-m2-cC_1rrp-a4-m1-cA
13 1rrp-a3-m2-cC 180 42 0.1806 0.0722 0.3095 1.7 1rrp-a3-m2-cC_1rrp-a3-m2-cA
14 1byu-a1-m1-cA 202 42 0.1806 0.0644 0.3095 1.8 1byu-a1-m1-cA_1byu-a1-m1-cB
15 1v08-a1-m1-cB 490 55 0.1944 0.0286 0.2545 2.3 1v08-a1-m1-cA_1v08-a1-m1-cB
16 1v08-a1-m1-cA 490 55 0.1944 0.0286 0.2545 2.3 1v08-a1-m1-cA_1v08-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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