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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
GHMEGKPKMEPAASSQAAVEELRTQVRELRSIIETMKDQQKREIKQLLSELDEEKKIRLR
LQMEVNDIKKALQSK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2n64-a1-m1-cC 75 75 1.0000 1.0000 1.0000 7.07e-48 2n64-a1-m1-cB_2n64-a1-m1-cC
2 2n64-a1-m1-cB 75 75 1.0000 1.0000 1.0000 7.07e-48 2n64-a1-m1-cB_2n64-a1-m1-cC
3 5abs-a1-m3-cA 63 63 0.8133 0.9683 0.9683 6.47e-32 5abs-a1-m2-cA_5abs-a1-m3-cA
4 5abs-a1-m2-cA 63 63 0.8133 0.9683 0.9683 6.47e-32 5abs-a1-m2-cA_5abs-a1-m3-cA
5 6jbj-a1-m1-cB 565 44 0.2000 0.0265 0.3409 0.74 6jbj-a1-m1-cA_6jbj-a1-m1-cB
6 6jbj-a1-m1-cA 565 44 0.2000 0.0265 0.3409 0.74 6jbj-a1-m1-cA_6jbj-a1-m1-cB
7 2avw-a2-m1-cC 289 38 0.1867 0.0484 0.3684 0.97 2avw-a2-m1-cC_2avw-a2-m1-cD
8 2avw-a2-m1-cD 296 38 0.1867 0.0473 0.3684 1.1 2avw-a2-m1-cC_2avw-a2-m1-cD
9 3tai-a1-m1-cA 423 42 0.2000 0.0355 0.3571 1.6 3tai-a1-m1-cA_3tai-a1-m1-cB
10 3tai-a1-m1-cB 423 42 0.2000 0.0355 0.3571 1.7 3tai-a1-m1-cA_3tai-a1-m1-cB
11 2fgy-a1-m1-cB 471 30 0.1333 0.0212 0.3333 3.6 2fgy-a1-m1-cA_2fgy-a1-m1-cB
12 2fgy-a1-m1-cA 471 30 0.1333 0.0212 0.3333 3.6 2fgy-a1-m1-cA_2fgy-a1-m1-cB
13 1hsj-a1-m1-cB 487 28 0.1467 0.0226 0.3929 4.1 1hsj-a1-m1-cA_1hsj-a1-m1-cB
14 1hsj-a1-m1-cA 487 28 0.1467 0.0226 0.3929 4.1 1hsj-a1-m1-cA_1hsj-a1-m1-cB
15 5d84-a1-m2-cA 318 43 0.1733 0.0409 0.3023 5.7 5d84-a1-m1-cA_5d84-a1-m2-cA
16 5d84-a1-m1-cA 318 43 0.1733 0.0409 0.3023 5.7 5d84-a1-m1-cA_5d84-a1-m2-cA
17 8glv-a1-m1-cOD 370 41 0.2400 0.0486 0.4390 5.7 8glv-a1-m1-c5C_8glv-a1-m1-cOD
18 8glv-a1-m1-c5C 370 41 0.2400 0.0486 0.4390 5.7 8glv-a1-m1-c5C_8glv-a1-m1-cOD
19 3ubk-a1-m1-cA 209 48 0.2533 0.0909 0.3958 7.0 3ubk-a1-m1-cB_3ubk-a1-m1-cA
20 4oci-a1-m2-cA 135 33 0.1467 0.0815 0.3333 7.5 4oci-a1-m1-cA_4oci-a1-m2-cA
21 4oci-a1-m1-cA 135 33 0.1467 0.0815 0.3333 7.5 4oci-a1-m1-cA_4oci-a1-m2-cA
22 4tvq-a1-m1-cB 185 36 0.1467 0.0595 0.3056 7.8 4tvq-a1-m1-cA_4tvq-a1-m1-cB
23 5f2k-a1-m1-cB 356 54 0.2133 0.0449 0.2963 8.6 5f2k-a1-m1-cB_5f2k-a1-m1-cA
24 5f2k-a1-m1-cA 358 54 0.2133 0.0447 0.2963 8.8 5f2k-a1-m1-cB_5f2k-a1-m1-cA
25 6nop-a1-m1-cA 260 40 0.2000 0.0577 0.3750 8.9 6nop-a1-m1-cA_6nop-a1-m1-cB
26 6nop-a1-m1-cB 262 40 0.2000 0.0573 0.3750 9.0 6nop-a1-m1-cA_6nop-a1-m1-cB
27 3rqg-a4-m1-cA 197 36 0.1467 0.0558 0.3056 9.0 3rqg-a4-m1-cA_3rqg-a4-m1-cC
28 3rqg-a4-m1-cC 212 36 0.1467 0.0519 0.3056 9.2 3rqg-a4-m1-cA_3rqg-a4-m1-cC, 3rqg-a4-m3-cB_3rqg-a4-m1-cC
29 3l8i-a4-m1-cC 212 36 0.1467 0.0519 0.3056 9.2 3l8i-a4-m1-cD_3l8i-a4-m1-cC
30 3rqg-a4-m3-cB 201 36 0.1467 0.0547 0.3056 9.2 3rqg-a4-m3-cB_3rqg-a4-m1-cC, 3rqg-a4-m3-cB_3rqg-a4-m1-cD
31 3rqg-a2-m1-cB 201 36 0.1467 0.0547 0.3056 9.2 3rqg-a2-m1-cB_3rqg-a2-m1-cD
32 3rqg-a4-m1-cD 203 36 0.1467 0.0542 0.3056 9.5 3rqg-a4-m3-cB_3rqg-a4-m1-cD
33 3rqg-a2-m1-cD 203 36 0.1467 0.0542 0.3056 9.5 3rqg-a2-m1-cB_3rqg-a2-m1-cD
34 3l8i-a4-m1-cD 203 36 0.1467 0.0542 0.3056 9.5 3l8i-a4-m1-cD_3l8i-a4-m1-cC

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Reference:
Jacob Schwartz et al.

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