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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
GHMKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRDFVPKVRIEVVVDDSIVDKV
VDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3bzq-a1-m3-cA 99 99 1.0000 1.0000 1.0000 3.13e-65 3bzq-a1-m2-cA_3bzq-a1-m3-cA
2 3bzq-a1-m2-cA 99 99 1.0000 1.0000 1.0000 3.13e-65 3bzq-a1-m2-cA_3bzq-a1-m3-cA
3 3lf0-a1-m1-cC 101 101 0.9899 0.9703 0.9703 2.05e-62 3lf0-a1-m1-cC_3lf0-a1-m1-cB
4 3lf0-a1-m1-cB 112 112 0.9899 0.8750 0.8750 1.10e-60 3lf0-a1-m1-cC_3lf0-a1-m1-cB
5 1ul3-a2-m3-cD 95 92 0.5556 0.5789 0.5978 6.10e-38 1ul3-a2-m2-cD_1ul3-a2-m3-cD
6 1ul3-a2-m2-cD 95 92 0.5556 0.5789 0.5978 6.10e-38 1ul3-a2-m2-cD_1ul3-a2-m3-cD
7 2xul-a1-m1-cA 106 105 0.5758 0.5377 0.5429 1.10e-36 2xul-a1-m1-cA_2xul-a1-m1-cC
8 2xul-a1-m1-cC 107 106 0.5758 0.5327 0.5377 1.47e-36 2xul-a1-m1-cA_2xul-a1-m1-cC
9 1ul3-a3-m5-cA 95 97 0.5455 0.5684 0.5567 4.18e-35 1ul3-a3-m1-cC_1ul3-a3-m5-cA, 1ul3-a3-m4-cB_1ul3-a3-m5-cA
10 1ul3-a3-m4-cB 94 97 0.5455 0.5745 0.5567 1.27e-34 1ul3-a3-m4-cB_1ul3-a3-m5-cA
11 1ul3-a3-m1-cC 94 97 0.5455 0.5745 0.5567 1.27e-34 1ul3-a3-m1-cC_1ul3-a3-m5-cA
12 3n5b-a1-m3-cA 112 112 0.5354 0.4732 0.4732 2.01e-34 3n5b-a1-m2-cA_3n5b-a1-m3-cA
13 3n5b-a1-m2-cA 112 112 0.5354 0.4732 0.4732 2.01e-34 3n5b-a1-m2-cA_3n5b-a1-m3-cA
14 2gw8-a1-m3-cA 99 98 0.5556 0.5556 0.5612 2.06e-34 2gw8-a1-m2-cA_2gw8-a1-m3-cA
15 2gw8-a1-m2-cA 99 98 0.5556 0.5556 0.5612 2.06e-34 2gw8-a1-m2-cA_2gw8-a1-m3-cA
16 2eg2-a2-m9-cA 95 97 0.5455 0.5684 0.5567 5.14e-34 2eg2-a2-m5-cA_2eg2-a2-m9-cA, 2eg2-a2-m6-cA_2eg2-a2-m9-cA
17 2eg2-a2-m6-cA 95 97 0.5455 0.5684 0.5567 5.14e-34 2eg2-a2-m6-cA_2eg2-a2-m9-cA
18 2eg2-a2-m5-cA 95 97 0.5455 0.5684 0.5567 5.14e-34 2eg2-a2-m5-cA_2eg2-a2-m9-cA
19 4c3l-a1-m3-cA 89 91 0.5354 0.5955 0.5824 8.16e-34 4c3l-a1-m2-cA_4c3l-a1-m3-cA
20 4c3l-a1-m2-cA 89 91 0.5354 0.5955 0.5824 8.16e-34 4c3l-a1-m2-cA_4c3l-a1-m3-cA
21 5l9n-a1-m3-cA 92 92 0.5354 0.5761 0.5761 7.28e-32 5l9n-a1-m2-cA_5l9n-a1-m3-cA
22 5l9n-a1-m2-cA 92 92 0.5354 0.5761 0.5761 7.28e-32 5l9n-a1-m2-cA_5l9n-a1-m3-cA
23 2pii-a1-m3-cA 112 112 0.5657 0.5000 0.5000 8.63e-32 2pii-a1-m2-cA_2pii-a1-m3-cA
24 2pii-a1-m2-cA 112 112 0.5657 0.5000 0.5000 8.63e-32 2pii-a1-m2-cA_2pii-a1-m3-cA
25 1hwu-a3-m1-cA 99 99 0.5859 0.5859 0.5859 9.50e-32 1hwu-a3-m1-cA_1hwu-a3-m2-cD, 1hwu-a3-m2-cF_1hwu-a3-m1-cA
26 4cnz-a1-m1-cB 100 100 0.5051 0.5000 0.5000 3.68e-31 4cnz-a1-m1-cA_4cnz-a1-m1-cB
27 4cnz-a1-m1-cA 100 100 0.5051 0.5000 0.5000 3.68e-31 4cnz-a1-m1-cA_4cnz-a1-m1-cB
28 7p4v-a1-m3-cA 113 113 0.5455 0.4779 0.4779 4.29e-31 7p4v-a1-m2-cA_7p4v-a1-m3-cA
29 7p4v-a1-m2-cA 113 113 0.5455 0.4779 0.4779 4.29e-31 7p4v-a1-m2-cA_7p4v-a1-m3-cA
30 1hwu-a3-m2-cD 99 99 0.5859 0.5859 0.5859 1.22e-30 1hwu-a3-m1-cA_1hwu-a3-m2-cD
31 2gnk-a2-m3-cA 95 97 0.4747 0.4947 0.4845 1.44e-29 2gnk-a2-m2-cA_2gnk-a2-m3-cA
32 2gnk-a2-m2-cA 95 97 0.4747 0.4947 0.4845 1.44e-29 2gnk-a2-m2-cA_2gnk-a2-m3-cA
33 4co2-a2-m3-cA 112 112 0.5051 0.4464 0.4464 3.06e-29 4co2-a2-m2-cA_4co2-a2-m3-cA
34 4co2-a2-m2-cA 112 112 0.5051 0.4464 0.4464 3.06e-29 4co2-a2-m2-cA_4co2-a2-m3-cA
35 2nuu-a4-m2-cK 112 112 0.4848 0.4286 0.4286 9.66e-29 2nuu-a4-m1-cH_2nuu-a4-m2-cK
36 2nuu-a4-m1-cH 112 112 0.4848 0.4286 0.4286 9.66e-29 2nuu-a4-m1-cH_2nuu-a4-m2-cK
37 2ns1-a1-m3-cB 113 112 0.4848 0.4248 0.4286 9.83e-29 2ns1-a1-m2-cB_2ns1-a1-m3-cB
38 2ns1-a1-m2-cB 113 112 0.4848 0.4248 0.4286 9.83e-29 2ns1-a1-m2-cB_2ns1-a1-m3-cB
39 7p50-a1-m1-cC 115 113 0.5354 0.4609 0.4690 2.90e-28 7p50-a1-m1-cB_7p50-a1-m1-cC
40 7p50-a1-m1-cB 115 113 0.5354 0.4609 0.4690 2.90e-28 7p50-a1-m1-cB_7p50-a1-m1-cC
41 1hwu-a3-m2-cF 91 97 0.5556 0.6044 0.5670 7.96e-28 1hwu-a3-m2-cE_1hwu-a3-m2-cF, 1hwu-a3-m2-cF_1hwu-a3-m1-cA
42 3ncp-a6-m5-cD 99 99 0.4747 0.4747 0.4747 6.56e-26 3ncp-a6-m4-cD_3ncp-a6-m5-cD, 3ncp-a6-m5-cD_3ncp-a6-m4-cC
43 3ncp-a6-m4-cD 99 99 0.4747 0.4747 0.4747 6.56e-26 3ncp-a6-m4-cD_3ncp-a6-m5-cD
44 3ncp-a6-m4-cC 100 99 0.4747 0.4700 0.4747 7.61e-26 3ncp-a6-m5-cD_3ncp-a6-m4-cC
45 7p52-a1-m3-cA 111 111 0.5253 0.4685 0.4685 8.67e-26 7p52-a1-m2-cA_7p52-a1-m3-cA
46 7p52-a1-m2-cA 111 111 0.5253 0.4685 0.4685 8.67e-26 7p52-a1-m2-cA_7p52-a1-m3-cA
47 2o66-a2-m2-cA 107 94 0.4545 0.4206 0.4787 1.60e-25 2o66-a2-m2-cC_2o66-a2-m2-cA
48 2o66-a2-m1-cA 107 94 0.4545 0.4206 0.4787 1.60e-25 2o66-a2-m2-cC_2o66-a2-m1-cA
49 3t9z-a2-m1-cD 93 90 0.4444 0.4731 0.4889 2.20e-25 3t9z-a2-m1-cD_3t9z-a2-m1-cF
50 3t9z-a2-m1-cF 94 90 0.4444 0.4681 0.4889 2.22e-25 3t9z-a2-m1-cD_3t9z-a2-m1-cF
51 1hwu-a3-m2-cE 84 90 0.5152 0.6071 0.5667 3.78e-25 1hwu-a3-m2-cE_1hwu-a3-m2-cF
52 3ta2-a2-m5-cB 109 105 0.4545 0.4128 0.4286 4.09e-24 3ta2-a2-m4-cB_3ta2-a2-m5-cB
53 3ta2-a2-m4-cB 109 105 0.4545 0.4128 0.4286 4.09e-24 3ta2-a2-m4-cB_3ta2-a2-m5-cB
54 2o66-a2-m2-cC 106 93 0.4343 0.4057 0.4624 7.91e-24 2o66-a2-m2-cC_2o66-a2-m1-cA, 2o66-a2-m2-cC_2o66-a2-m2-cA
55 1v3r-a1-m1-cA 92 91 0.4343 0.4674 0.4725 1.07e-23 1v3r-a1-m1-cC_1v3r-a1-m1-cA
56 1ufl-a2-m2-cC 99 96 0.4444 0.4444 0.4583 1.15e-23 1ufl-a2-m2-cC_1ufl-a2-m1-cA
57 1v3r-a1-m1-cC 90 91 0.4343 0.4778 0.4725 1.47e-23 1v3r-a1-m1-cC_1v3r-a1-m1-cA
58 1ufl-a2-m1-cA 108 106 0.4444 0.4074 0.4151 4.99e-22 1ufl-a2-m2-cC_1ufl-a2-m1-cA
59 2rd5-a1-m3-cD 126 109 0.4444 0.3492 0.4037 5.86e-22 2rd5-a1-m2-cD_2rd5-a1-m3-cD
60 2rd5-a1-m2-cD 126 109 0.4444 0.3492 0.4037 5.86e-22 2rd5-a1-m2-cD_2rd5-a1-m3-cD
61 3l7p-a1-m1-cB 88 89 0.3939 0.4432 0.4382 4.28e-21 3l7p-a1-m1-cB_3l7p-a1-m1-cF
62 3l7p-a1-m1-cF 88 88 0.3838 0.4318 0.4318 3.68e-20 3l7p-a1-m1-cB_3l7p-a1-m1-cF, 3l7p-a1-m1-cF_3l7p-a1-m1-cC
63 7o4x-a1-m3-cA 103 100 0.4040 0.3883 0.4000 8.46e-20 7o4x-a1-m2-cA_7o4x-a1-m3-cA
64 7o4x-a1-m2-cA 103 100 0.4040 0.3883 0.4000 8.46e-20 7o4x-a1-m2-cA_7o4x-a1-m3-cA
65 3l7p-a1-m1-cC 91 91 0.3939 0.4286 0.4286 8.36e-19 3l7p-a1-m1-cF_3l7p-a1-m1-cC
66 4ozn-a1-m1-cC 113 107 0.4444 0.3894 0.4112 1.24e-16 4ozn-a1-m1-cC_4ozn-a1-m1-cA
67 4ozn-a1-m1-cA 116 111 0.4444 0.3793 0.3964 8.62e-16 4ozn-a1-m1-cC_4ozn-a1-m1-cA
68 4r25-a1-m3-cA 114 113 0.3333 0.2895 0.2920 2.31e-13 4r25-a1-m2-cA_4r25-a1-m3-cA
69 4r25-a1-m2-cA 114 113 0.3333 0.2895 0.2920 2.31e-13 4r25-a1-m2-cA_4r25-a1-m3-cA
70 4usj-a1-m3-cD 142 109 0.3838 0.2676 0.3486 4.22e-13 4usj-a1-m2-cD_4usj-a1-m3-cD
71 4usj-a1-m2-cD 142 109 0.3838 0.2676 0.3486 4.22e-13 4usj-a1-m2-cD_4usj-a1-m3-cD
72 4yd9-a1-m1-cb 1656 54 0.1515 0.0091 0.2778 0.023 4yd9-a1-m1-cA_4yd9-a1-m1-cb
73 4yd9-a1-m1-cA 1656 54 0.1515 0.0091 0.2778 0.023 4yd9-a1-m1-cA_4yd9-a1-m1-cb
74 3pdk-a1-m1-cA 445 96 0.2626 0.0584 0.2708 1.1 3pdk-a1-m1-cB_3pdk-a1-m1-cA
75 3pdk-a1-m1-cB 444 96 0.2626 0.0586 0.2708 1.1 3pdk-a1-m1-cB_3pdk-a1-m1-cA
76 5tx7-a1-m1-cB 322 27 0.1313 0.0404 0.4815 1.2 5tx7-a1-m1-cB_5tx7-a1-m1-cA
77 5tx7-a1-m1-cA 323 27 0.1313 0.0402 0.4815 1.2 5tx7-a1-m1-cB_5tx7-a1-m1-cA
78 5i10-a2-m2-cA 192 60 0.1515 0.0781 0.2500 1.4 5i10-a2-m1-cA_5i10-a2-m2-cA
79 5i10-a2-m1-cA 192 60 0.1515 0.0781 0.2500 1.4 5i10-a2-m1-cA_5i10-a2-m2-cA
80 8b9y-a2-m1-cD 321 42 0.1616 0.0498 0.3810 6.9 8b9y-a2-m1-cD_8b9y-a2-m1-cC
81 8b9y-a2-m1-cC 330 42 0.1616 0.0485 0.3810 7.1 8b9y-a2-m1-cD_8b9y-a2-m1-cC
82 3j8h-a1-m1-cG 3660 37 0.1313 0.0036 0.3514 7.4 3j8h-a1-m1-cE_3j8h-a1-m1-cG
83 3j8h-a1-m1-cE 3660 37 0.1313 0.0036 0.3514 7.4 3j8h-a1-m1-cE_3j8h-a1-m1-cG
84 1z7w-a2-m2-cA 320 75 0.2121 0.0656 0.2800 8.4 1z7w-a2-m1-cA_1z7w-a2-m2-cA
85 1z7w-a2-m1-cA 320 75 0.2121 0.0656 0.2800 8.4 1z7w-a2-m1-cA_1z7w-a2-m2-cA
86 3haz-a1-m2-cB 974 43 0.1212 0.0123 0.2791 9.2 3haz-a1-m1-cB_3haz-a1-m2-cB, 3haz-a1-m2-cB_3haz-a1-m2-cA
87 3haz-a1-m1-cB 974 43 0.1212 0.0123 0.2791 9.2 3haz-a1-m1-cB_3haz-a1-m2-cB
88 3haz-a1-m2-cA 983 43 0.1212 0.0122 0.2791 9.2 3haz-a1-m2-cB_3haz-a1-m2-cA
89 3fca-a1-m2-cB 290 27 0.1212 0.0414 0.4444 10.0 3fca-a1-m2-cA_3fca-a1-m2-cB
90 3fca-a1-m2-cA 290 27 0.1212 0.0414 0.4444 10.0 3fca-a1-m2-cA_3fca-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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