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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
GHMVVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRC
QFCRLKKCLEMGMKMESVQS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7xv9-a1-m1-cB 80 80 1.0000 1.0000 1.0000 8.24e-55 7xv9-a1-m1-cA_7xv9-a1-m1-cB
2 7xv9-a1-m1-cA 80 80 1.0000 1.0000 1.0000 8.24e-55 7xv9-a1-m1-cA_7xv9-a1-m1-cB
3 7xv6-a1-m1-cA 84 77 0.9625 0.9167 1.0000 2.86e-52 7xv6-a1-m1-cB_7xv6-a1-m1-cA
4 7xv6-a1-m1-cB 77 77 0.9625 1.0000 1.0000 3.54e-52 7xv6-a1-m1-cB_7xv6-a1-m1-cA
5 6fbq-a1-m1-cB 81 73 0.6250 0.6173 0.6849 6.82e-36 6fbq-a1-m1-cA_6fbq-a1-m1-cB
6 6fbq-a1-m1-cA 80 73 0.6250 0.6250 0.6849 9.32e-36 6fbq-a1-m1-cA_6fbq-a1-m1-cB
7 6l6l-a1-m1-cA 85 73 0.5125 0.4824 0.5616 1.50e-26 6l6l-a1-m1-cB_6l6l-a1-m1-cA
8 6l6l-a1-m1-cB 84 73 0.5125 0.4881 0.5616 1.72e-26 6l6l-a1-m1-cB_6l6l-a1-m1-cA
9 8ifo-a1-m1-cB 80 72 0.4875 0.4875 0.5417 1.02e-23 8ifo-a1-m1-cA_8ifo-a1-m1-cB
10 8ifo-a1-m1-cA 76 72 0.4875 0.5132 0.5417 1.07e-23 8ifo-a1-m1-cA_8ifo-a1-m1-cB
11 4oln-a1-m1-cA 70 66 0.5000 0.5714 0.6061 7.16e-23 4oln-a1-m1-cB_4oln-a1-m1-cA
12 1hcq-a2-m1-cE 74 69 0.4750 0.5135 0.5507 1.81e-22 1hcq-a2-m1-cF_1hcq-a2-m1-cE
13 4oln-a1-m1-cB 67 66 0.5000 0.5970 0.6061 1.98e-22 4oln-a1-m1-cB_4oln-a1-m1-cA
14 1hcq-a2-m1-cF 71 69 0.4750 0.5352 0.5507 2.67e-21 1hcq-a2-m1-cF_1hcq-a2-m1-cE
15 1r4i-a1-m1-cA 74 68 0.4375 0.4730 0.5147 1.74e-20 1r4i-a1-m1-cB_1r4i-a1-m1-cA
16 1r4i-a1-m1-cB 71 68 0.4375 0.4930 0.5147 2.17e-20 1r4i-a1-m1-cB_1r4i-a1-m1-cA
17 2c7a-a1-m1-cB 76 70 0.4000 0.4211 0.4571 8.54e-18 2c7a-a1-m1-cB_2c7a-a1-m1-cA
18 2c7a-a1-m1-cA 78 70 0.4000 0.4103 0.4571 1.07e-17 2c7a-a1-m1-cB_2c7a-a1-m1-cA
19 2aus-a5-m3-cB 53 39 0.1500 0.2264 0.3077 0.95 2aus-a5-m1-cB_2aus-a5-m3-cB
20 2aus-a5-m1-cB 53 39 0.1500 0.2264 0.3077 0.95 2aus-a5-m1-cB_2aus-a5-m3-cB
21 2aus-a1-m2-cD 53 39 0.1500 0.2264 0.3077 0.95 2aus-a1-m1-cD_2aus-a1-m2-cD
22 2aus-a1-m1-cD 53 39 0.1500 0.2264 0.3077 0.95 2aus-a1-m1-cD_2aus-a1-m2-cD
23 5ix1-a1-m1-cA 414 29 0.1250 0.0242 0.3448 4.0 5ix1-a1-m1-cA_5ix1-a1-m1-cB
24 5ix1-a1-m1-cB 419 29 0.1250 0.0239 0.3448 4.3 5ix1-a1-m1-cA_5ix1-a1-m1-cB
25 4bzi-a1-m1-cL 735 33 0.1625 0.0177 0.3939 6.2 4bzi-a1-m1-cE_4bzi-a1-m1-cL
26 4bzi-a1-m1-cE 735 33 0.1625 0.0177 0.3939 6.2 4bzi-a1-m1-cE_4bzi-a1-m1-cL
27 2ey4-a3-m2-cF 52 39 0.1375 0.2115 0.2821 7.5 2ey4-a3-m1-cE_2ey4-a3-m2-cF
28 2ey4-a3-m1-cE 52 39 0.1375 0.2115 0.2821 7.5 2ey4-a3-m1-cE_2ey4-a3-m2-cF

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Reference:
Jacob Schwartz et al.

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